Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
ccr141380	Chondrus crispus	0.0	716	355	100.00
ccr141460	Chondrus crispus	1e-63	218	178	87.64
VC00G87170	Volvox carteri	2e-23	99.4	121	45.45
CR10G05780	Chlamydomonas reinhardtii	9e-21	91.7	110	48.18
OS06G50930	Oryza sativa	1e-18	86.7	99	42.42
PP00001G00600	Physcomitrella patens	2e-17	84.0	92	43.48
ATR_00001G01640	Amborella trichopoda	5e-17	80.5	94	39.36
ES0080G00090	Ectocarpus siliculosus	3e-16	78.2	116	41.38
AT4G35770	Arabidopsis thaliana	7e-16	79.0	94	40.43
AT5G66040	Arabidopsis thaliana	1e-15	77.0	112	39.29
gsu98730	Galdieria sulphuraria	1e-15	77.8	127	34.65
AC00G80510	Asterochloris sp. Cgr-DA1pho v2.0	6e-15	75.9	120	40.00
PI00G38740	Picochlorum sp. SENEW3 (SE3)	7e-15	75.5	118	38.98
PP00081G00640	Physcomitrella patens	8e-15	75.9	92	41.30
RCC4223.02g11355	Picochlorum_RCC4223	2e-14	74.7	118	37.29
AT5G66170	Arabidopsis thaliana	2e-13	71.2	102	42.16
OS04G17660	Oryza sativa	2e-13	71.2	87	45.98
ATR_00018G01210	Amborella trichopoda	3e-13	72.8	87	42.53
OS02G06290	Oryza sativa	2e-12	68.9	88	40.91
gsu13530	Galdieria sulphuraria	2e-12	67.8	109	33.94
AA0005G02070	Aureococcus anophagefferens	5e-12	66.2	93	38.71
gsu40020	Galdieria sulphuraria	8e-12	66.6	106	31.13
CNC64A_016G01400	Chlorella sp NC64A	4e-11	63.9	87	41.38
OS02G01220	Oryza sativa	4e-11	64.3	96	36.46
AT2G17850	Arabidopsis thaliana	6e-11	64.3	96	36.46
BPRRCC1105_08G04060	Bathycoccus prasinos	1e-10	63.5	112	35.71
AT2G21045	Arabidopsis thaliana	1e-09	60.8	92	35.87
CNC64A_016G01370	Chlorella sp NC64A	5e-09	58.2	90	36.67
VC00G27330	Volvox carteri	8e-09	60.1	116	36.21
CR13G02680	Chlamydomonas reinhardtii	1e-08	58.5	99	42.42
CM17G04660	Cyanidioschyzon merolae	2e-08	57.4	114	34.21
AT4G27700	Arabidopsis thaliana	2e-08	57.8	136	28.68
RCC4223.181g00020	Picochlorum_RCC4223	3e-08	56.2	98	34.69
CNC64A_016G01410	Chlorella sp NC64A	4e-08	55.5	105	38.10
OS12G24020	Oryza sativa	5e-08	55.8	66	43.94
CV00G82930	Coccomyxa subellipsoidea C-169	6e-08	55.1	103	32.04
OS09G36040	Oryza sativa	6e-08	56.6	134	28.36
VC00G43040	Volvox carteri	8e-08	56.2	99	38.38
CNC64A_011G02170	Chlorella sp NC64A	1e-07	55.5	108	36.11
AC00G64880	Asterochloris sp. Cgr-DA1pho v2.0	2e-07	55.1	99	35.35
CR14G05290	Chlamydomonas reinhardtii	3e-07	54.7	95	33.68
VC00G133230	Volvox carteri	3e-07	53.5	91	32.97
HE0000G46360	Helicosporidium sp.	7e-07	52.4	89	31.46
ATR_00027G00800	Amborella trichopoda	8e-07	53.5	137	26.28
ES0290G00100	Ectocarpus siliculosus	8e-07	54.3	105	34.29
AA0039G00090	Aureococcus anophagefferens	1e-06	53.9	91	35.16
Naga_100016g40	Nannochloropsis gaditana	2e-06	53.1	116	34.48
CR16G04640	Chlamydomonas reinhardtii	4e-06	52.0	100	35.00
CV00G11240	Coccomyxa subellipsoidea C-169	5e-06	51.6	134	29.10
AP00G25030	Auxenochlorella protothecoides	6e-06	50.4	115	29.57
AA0028G00110	Aureococcus anophagefferens	7e-06	51.6	94	37.23

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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