Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
PP00120G00370	Physcomitrella patens	0.0	1971	946	100.00
PP00028G02030	Physcomitrella patens	0.0	1449	808	84.53
PP00303G00240	Physcomitrella patens	0.0	1284	810	75.43
PP00093G00500	Physcomitrella patens	0.0	1136	779	67.01
ATR_00106G00050	Amborella trichopoda	0.0	1132	776	67.65
AT4G02280	Arabidopsis thaliana	0.0	1123	778	66.84
OS03G22120	Oryza sativa	0.0	1097	776	65.98
AT5G49190	Arabidopsis thaliana	0.0	1083	777	65.38
OS06G09450	Oryza sativa	0.0	1073	779	65.08
OS07G42490	Oryza sativa	0.0	1052	779	63.93
OS03G28330	Oryza sativa	0.0	1046	779	63.80
AT3G43190	Arabidopsis thaliana	0.0	1023	776	62.63
AT5G20830	Arabidopsis thaliana	0.0	993	777	61.52
OS04G24430	Oryza sativa	0.0	910	802	52.37
ATR_00044G00210	Amborella trichopoda	0.0	908	810	53.83
AT1G73370	Arabidopsis thaliana	0.0	883	797	52.07
CV00G95450	Coccomyxa subellipsoidea C-169	0.0	879	745	56.24
OS02G58480	Oryza sativa	0.0	878	805	52.17
PI00G03370	Picochlorum sp. SENEW3 (SE3)	0.0	877	773	54.59
AT5G37180	Arabidopsis thaliana	0.0	872	812	51.60
RCC4223.04g06590	Picochlorum_RCC4223	0.0	870	771	54.47
OS04G17650	Oryza sativa	0.0	856	737	54.27
HE0000G56330	Helicosporidium sp.	0.0	833	807	50.68
CNC64A_002G04500	Chlorella sp NC64A	0.0	743	737	51.15
AC00G61310	Asterochloris sp. Cgr-DA1pho v2.0	0.0	707	789	46.64
AP00G37470	Auxenochlorella protothecoides	0.0	607	525	56.38
AP00G37480	Auxenochlorella protothecoides	6e-121	382	397	49.12
AC00G44410	Asterochloris sp. Cgr-DA1pho v2.0	8e-33	139	556	24.10
RCC4223.05g02250	Picochlorum_RCC4223	5e-32	139	652	24.54
ATR_00099G00850	Amborella trichopoda	6e-32	138	569	24.96
AT5G11110	Arabidopsis thaliana	1e-31	137	538	25.65
AT4G10120	Arabidopsis thaliana	2e-31	137	509	25.34
PI00G14670	Picochlorum sp. SENEW3 (SE3)	9e-31	135	653	24.96
PP00131G00600	Physcomitrella patens	2e-30	133	545	25.50
ATR_00033G01740	Amborella trichopoda	3e-30	133	535	25.61
OS02G09170	Oryza sativa	6e-30	132	522	24.52
OS06G43630	Oryza sativa	9e-30	131	567	24.69
gsu138950	Galdieria sulphuraria	1e-29	130	497	24.55
OS01G69030	Oryza sativa	3e-29	130	518	24.90
HE0000G57540	Helicosporidium sp.	3e-29	127	507	25.44
PP00066G01210	Physcomitrella patens	5e-29	129	553	24.23
AT1G04920	Arabidopsis thaliana	6e-29	129	515	25.44
AT5G20280	Arabidopsis thaliana	4e-28	126	537	24.02
OS08G20660	Oryza sativa	7e-28	125	532	25.56
OS11G12810	Oryza sativa	8e-28	125	554	23.83
CNC64A_014G03230	Chlorella sp NC64A	4e-24	112	193	33.16
AP00G64190	Auxenochlorella protothecoides	3e-22	107	191	32.46
CR12G08850	Chlamydomonas reinhardtii	3e-19	98.2	185	30.81
CV00G68630	Coccomyxa subellipsoidea C-169	4e-17	90.9	246	28.46
PP00003G01400	Physcomitrella patens	2e-11	66.2	46	60.87
phs317530	Phytophtora sojae	1e-09	65.9	213	28.17
DDB_G0272730	Dictyostelium discoideum	1e-08	62.0	206	23.30
CM20G01680	Cyanidioschyzon merolae	2e-08	62.0	237	21.52
ENSG00000119523	Homo sapiens	2e-08	61.6	239	25.94
ES0097G00100	Ectocarpus siliculosus	2e-07	58.9	200	28.50
CV00G77080	Coccomyxa subellipsoidea C-169	2e-07	58.2	149	30.87
AT1G78800	Arabidopsis thaliana	6e-07	57.0	193	23.32
MRCC299_01G01480	Micromonas sp RCC299	3e-06	54.7	233	22.32
WBGene00017282	Caenorhabditis elegans	3e-06	54.7	233	25.32

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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