Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
PP00093G00500	Physcomitrella patens	0.0	1886	908	100.00
PP00303G00240	Physcomitrella patens	0.0	1165	815	67.36
ATR_00106G00050	Amborella trichopoda	0.0	1163	803	67.37
AT4G02280	Arabidopsis thaliana	0.0	1157	805	66.83
PP00028G02030	Physcomitrella patens	0.0	1154	822	65.21
OS03G22120	Oryza sativa	0.0	1153	804	66.42
PP00120G00370	Physcomitrella patens	0.0	1136	779	67.01
AT5G49190	Arabidopsis thaliana	0.0	1082	804	62.06
OS07G42490	Oryza sativa	0.0	1079	817	62.18
OS03G28330	Oryza sativa	0.0	1073	809	62.18
OS06G09450	Oryza sativa	0.0	1071	812	61.82
AT3G43190	Arabidopsis thaliana	0.0	1049	811	61.41
AT5G20830	Arabidopsis thaliana	0.0	1026	811	60.67
ATR_00044G00210	Amborella trichopoda	0.0	930	807	54.65
OS04G24430	Oryza sativa	0.0	912	809	53.52
CV00G95450	Coccomyxa subellipsoidea C-169	0.0	897	742	57.68
AT1G73370	Arabidopsis thaliana	0.0	888	810	52.47
OS02G58480	Oryza sativa	0.0	885	807	53.41
AT5G37180	Arabidopsis thaliana	0.0	882	799	52.19
PI00G03370	Picochlorum sp. SENEW3 (SE3)	0.0	873	803	53.30
RCC4223.04g06590	Picochlorum_RCC4223	0.0	865	804	52.61
OS04G17650	Oryza sativa	0.0	857	776	53.22
HE0000G56330	Helicosporidium sp.	0.0	843	813	51.54
AC00G61310	Asterochloris sp. Cgr-DA1pho v2.0	0.0	754	813	48.22
CNC64A_002G04500	Chlorella sp NC64A	0.0	753	751	51.26
AP00G37470	Auxenochlorella protothecoides	0.0	613	528	56.06
AP00G37480	Auxenochlorella protothecoides	1e-114	365	412	46.36
OS02G09170	Oryza sativa	1e-33	144	519	26.20
OS06G43630	Oryza sativa	1e-33	143	519	26.97
OS01G69030	Oryza sativa	6e-31	135	519	27.36
ATR_00033G01740	Amborella trichopoda	2e-30	134	504	26.39
AC00G44410	Asterochloris sp. Cgr-DA1pho v2.0	2e-30	131	522	25.86
ATR_00099G00850	Amborella trichopoda	2e-30	133	519	25.82
AT4G10120	Arabidopsis thaliana	3e-29	130	529	26.65
AT1G04920	Arabidopsis thaliana	3e-29	129	519	25.82
AT5G11110	Arabidopsis thaliana	1e-27	124	522	25.86
PP00066G01210	Physcomitrella patens	5e-27	122	544	25.37
AT5G20280	Arabidopsis thaliana	7e-27	122	520	25.38
gsu138950	Galdieria sulphuraria	2e-26	120	497	24.75
OS11G12810	Oryza sativa	1e-25	118	538	24.91
OS08G20660	Oryza sativa	3e-25	117	527	25.05
PP00131G00600	Physcomitrella patens	4e-25	116	550	24.18
RCC4223.05g02250	Picochlorum_RCC4223	5e-24	113	198	33.33
PI00G14670	Picochlorum sp. SENEW3 (SE3)	1e-23	112	198	33.33
HE0000G57540	Helicosporidium sp.	3e-23	109	465	23.66
CNC64A_014G03230	Chlorella sp NC64A	2e-21	103	198	31.82
AP00G64190	Auxenochlorella protothecoides	2e-20	102	196	30.61
CR12G08850	Chlamydomonas reinhardtii	5e-20	100	190	31.58
CV00G68630	Coccomyxa subellipsoidea C-169	2e-17	92.0	265	28.68
CM20G01680	Cyanidioschyzon merolae	8e-08	59.7	200	24.00
PP00003G01400	Physcomitrella patens	1e-07	54.7	46	47.83
AA0018G01130	Aureococcus anophagefferens	8e-07	56.6	202	27.23
FBgn0035401	Drosophila melanogaster	1e-06	56.2	157	26.11
WBGene00017282	Caenorhabditis elegans	9e-06	53.1	231	25.54

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment