Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
PP00028G02030	Physcomitrella patens	0.0	1737	837	100.00
PP00120G00370	Physcomitrella patens	0.0	1449	808	84.53
PP00303G00240	Physcomitrella patens	0.0	1357	833	77.91
AT4G02280	Arabidopsis thaliana	0.0	1165	809	66.50
ATR_00106G00050	Amborella trichopoda	0.0	1158	813	66.54
PP00093G00500	Physcomitrella patens	0.0	1154	822	65.21
OS03G22120	Oryza sativa	0.0	1139	806	65.76
AT5G49190	Arabidopsis thaliana	0.0	1113	803	65.01
OS06G09450	Oryza sativa	0.0	1093	805	64.35
OS07G42490	Oryza sativa	0.0	1074	807	62.95
OS03G28330	Oryza sativa	0.0	1070	813	62.98
AT3G43190	Arabidopsis thaliana	0.0	1050	805	61.74
AT5G20830	Arabidopsis thaliana	0.0	1030	804	61.57
OS04G24430	Oryza sativa	0.0	937	819	52.87
ATR_00044G00210	Amborella trichopoda	0.0	924	812	53.94
OS02G58480	Oryza sativa	0.0	911	821	53.23
AT1G73370	Arabidopsis thaliana	0.0	896	813	51.54
CV00G95450	Coccomyxa subellipsoidea C-169	0.0	887	752	56.38
OS04G17650	Oryza sativa	0.0	886	754	54.91
RCC4223.04g06590	Picochlorum_RCC4223	0.0	878	802	53.62
PI00G03370	Picochlorum sp. SENEW3 (SE3)	0.0	876	802	53.12
AT5G37180	Arabidopsis thaliana	0.0	871	799	51.44
HE0000G56330	Helicosporidium sp.	0.0	850	828	51.21
CNC64A_002G04500	Chlorella sp NC64A	0.0	738	728	51.10
AC00G61310	Asterochloris sp. Cgr-DA1pho v2.0	0.0	711	791	46.40
AP00G37470	Auxenochlorella protothecoides	0.0	598	522	56.32
AP00G37480	Auxenochlorella protothecoides	2e-118	373	410	46.59
AC00G44410	Asterochloris sp. Cgr-DA1pho v2.0	2e-34	143	553	25.32
ATR_00099G00850	Amborella trichopoda	7e-33	141	596	24.33
AT5G11110	Arabidopsis thaliana	1e-32	140	535	24.86
AT1G04920	Arabidopsis thaliana	4e-32	139	517	26.50
OS02G09170	Oryza sativa	7e-32	137	522	24.71
OS06G43630	Oryza sativa	8e-32	137	569	25.31
OS01G69030	Oryza sativa	2e-31	136	538	25.28
PP00131G00600	Physcomitrella patens	4e-31	135	560	25.18
ATR_00033G01740	Amborella trichopoda	5e-31	135	585	24.96
PP00066G01210	Physcomitrella patens	1e-30	134	558	24.73
AT4G10120	Arabidopsis thaliana	1e-30	134	515	24.85
OS11G12810	Oryza sativa	1e-29	130	535	23.74
OS08G20660	Oryza sativa	2e-29	130	540	25.19
PI00G14670	Picochlorum sp. SENEW3 (SE3)	3e-29	129	568	24.47
AT5G20280	Arabidopsis thaliana	2e-28	126	530	23.58
gsu138950	Galdieria sulphuraria	3e-28	125	508	24.21
HE0000G57540	Helicosporidium sp.	4e-28	124	485	24.95
CNC64A_014G03230	Chlorella sp NC64A	5e-23	108	193	32.64
RCC4223.05g02250	Picochlorum_RCC4223	2e-22	107	193	32.12
AP00G64190	Auxenochlorella protothecoides	7e-22	105	191	32.46
CR12G08850	Chlamydomonas reinhardtii	1e-17	92.8	196	28.57
CV00G68630	Coccomyxa subellipsoidea C-169	3e-15	84.3	258	27.91
PP00003G01400	Physcomitrella patens	9e-13	69.7	46	67.39
PP00079G01260	Physcomitrella patens	1e-07	55.8	57	52.63
CM20G01680	Cyanidioschyzon merolae	2e-07	58.5	237	21.94
DDB_G0272730	Dictyostelium discoideum	2e-07	58.2	174	25.29
ENSG00000119523	Homo sapiens	8e-07	56.2	241	24.90
CM18G03460	Cyanidioschyzon merolae	2e-06	55.5	198	26.77
ccr138580	Chondrus crispus	6e-06	53.5	167	26.35

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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