Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
PI00G68540	Picochlorum sp. SENEW3 (SE3)	0.0	1268	617	100.00
RCC4223.04g05780	Picochlorum_RCC4223	0.0	1172	614	92.02
CNC64A_037G00370	Chlorella sp NC64A	0.0	648	569	57.47
AC00G81700	Asterochloris sp. Cgr-DA1pho v2.0	0.0	618	583	51.46
CV00G70600	Coccomyxa subellipsoidea C-169	0.0	606	573	52.01
VC00G100730	Volvox carteri	0.0	599	585	50.77
CR12G06760	Chlamydomonas reinhardtii	0.0	599	591	49.92
ES0003G00250	Ectocarpus siliculosus	5e-167	497	559	46.51
FC007G06160	Fragilariopsis cylindrus	7e-145	439	560	43.39
AA0010G01840	Aureococcus anophagefferens	3e-138	422	567	42.33
emh310600	Emiliania huxleyi	3e-137	421	574	40.42
PTI_02G04580	Phaeodactylum tricornutum	1e-134	414	576	41.15
emh197990	Emiliania huxleyi	8e-132	407	622	39.55
emh706340	Emiliania huxleyi	8e-132	407	622	39.55
Naga_100099g13	Nannochloropsis gaditana	1e-127	412	616	41.56
ccr175760	Chondrus crispus	1e-118	373	560	38.75
CM16G00880	Cyanidioschyzon merolae	5e-111	353	606	38.61
phs197510	Phytophtora sojae	2e-104	335	586	36.18
phs198930	Phytophtora sojae	2e-99	323	614	34.69
phs198830	Phytophtora sojae	7e-99	320	568	35.21
ENSG00000016391	Homo sapiens	8e-91	299	597	32.16
WBGene00007917	Caenorhabditis elegans	4e-88	292	576	33.33
FBgn0001112	Drosophila melanogaster	9e-79	268	585	32.31
FBgn0030598	Drosophila melanogaster	4e-75	258	584	33.56
FBgn0030592	Drosophila melanogaster	1e-73	256	591	32.66
FBgn0266435	Drosophila melanogaster	2e-68	239	596	31.71
FBgn0030590	Drosophila melanogaster	3e-68	241	598	31.27
TP08G04640	Thalassiosira pseudonana	8e-68	236	529	32.14
Naga_100004g95	Nannochloropsis gaditana	1e-67	238	608	32.57
FBgn0030587	Drosophila melanogaster	6e-67	236	589	31.07
FBgn0039415	Drosophila melanogaster	8e-65	230	583	30.87
FBgn0030594	Drosophila melanogaster	2e-64	229	580	30.34
FBgn0030588	Drosophila melanogaster	1e-63	226	587	32.37
emh610010	Emiliania huxleyi	2e-63	226	610	32.30
emh381540	Emiliania huxleyi	1e-61	222	619	31.50
FBgn0030586	Drosophila melanogaster	4e-61	220	591	29.10
FBgn0030593	Drosophila melanogaster	6e-61	219	587	31.18
AA0058G00090	Aureococcus anophagefferens	8e-59	219	576	31.42
FBgn0030589	Drosophila melanogaster	7e-56	205	585	31.28
gsu91210	Galdieria sulphuraria	2e-49	179	304	36.84
gsu91190	Galdieria sulphuraria	5e-49	177	194	46.91
phs157680	Phytophtora sojae	1e-47	182	600	26.83
FBgn0030596	Drosophila melanogaster	5e-47	179	313	36.10
ES0089G00140	Ectocarpus siliculosus	6e-44	171	670	26.72
DDB_G0287229	Dictyostelium discoideum	1e-41	163	602	25.91
Naga_100105g4	Nannochloropsis gaditana	1e-41	164	342	34.21
FC027G00320	Fragilariopsis cylindrus	2e-40	159	596	26.34
AA0005G05800	Aureococcus anophagefferens	2e-39	159	608	28.78
PTI_02G04520	Phaeodactylum tricornutum	1e-37	150	596	25.34
FBgn0037896	Drosophila melanogaster	8e-37	149	591	26.73
phs172930	Phytophtora sojae	3e-36	145	405	27.90
Naga_100040g2	Nannochloropsis gaditana	6e-35	141	491	28.51
FBgn0030597	Drosophila melanogaster	9e-34	140	636	26.42
PP00078G00400	Physcomitrella patens	1e-29	127	585	27.01
PTI_10G02300	Phaeodactylum tricornutum	5e-29	127	676	24.11
OS08G31030	Oryza sativa	2e-26	117	594	24.58
Naga_100225g10	Nannochloropsis gaditana	2e-26	117	328	30.18
ATR_00036G00190	Amborella trichopoda	3e-26	117	614	24.92
ATR_00069G01340	Amborella trichopoda	2e-25	115	574	24.39
ccr36220	Chondrus crispus	3e-25	114	592	26.01
AA0005G05600	Aureococcus anophagefferens	7e-24	103	154	39.61
OS09G19930	Oryza sativa	1e-23	109	595	24.37
OS02G45530	Oryza sativa	2e-23	108	609	24.96
OS10G38050	Oryza sativa	2e-22	105	590	23.90
emh222900	Emiliania huxleyi	4e-22	104	619	24.56
ATR_00025G03910	Amborella trichopoda	8e-22	103	342	30.12
emh92480	Emiliania huxleyi	2e-21	97.8	203	36.45
AT1G14185	Arabidopsis thaliana	1e-20	99.4	576	23.61
AA0002G03300	Aureococcus anophagefferens	2e-20	100	613	24.47
AT1G14190	Arabidopsis thaliana	4e-20	97.8	580	23.45
AA0058G00110	Aureococcus anophagefferens	5e-20	95.5	195	32.31
PP00078G00390	Physcomitrella patens	2e-19	95.5	323	29.41
ES0475G00020	Ectocarpus siliculosus	4e-19	95.5	314	28.66
AT3G56060	Arabidopsis thaliana	5e-19	94.7	585	24.44
ccr51120	Chondrus crispus	1e-18	94.0	323	28.17
AT1G72970	Arabidopsis thaliana	1e-18	94.0	582	23.71
OS06G44540	Oryza sativa	1e-18	93.6	599	23.21
AT5G51950	Arabidopsis thaliana	2e-18	92.8	325	29.23
emh92500	Emiliania huxleyi	3e-18	91.3	381	25.98
OS04G48400	Oryza sativa	4e-18	92.0	596	23.66
AT1G12570	Arabidopsis thaliana	6e-18	91.7	319	29.15
FC014G01320	Fragilariopsis cylindrus	5e-17	89.0	612	24.35
emh223740	Emiliania huxleyi	7e-17	84.7	177	33.90
phs36230	Phytophtora sojae	8e-16	85.1	581	24.78
AT1G73050	Arabidopsis thaliana	5e-14	79.0	321	27.73
AT5G51930	Arabidopsis thaliana	5e-14	79.0	316	27.53
emh416920	Emiliania huxleyi	9e-13	74.7	157	34.39
PI00G66040	Picochlorum sp. SENEW3 (SE3)	2e-12	73.9	362	25.14
phs192170	Phytophtora sojae	4e-12	73.6	569	23.55
RCC4223.08g04290	Picochlorum_RCC4223	2e-11	70.9	365	24.38
phs334210	Phytophtora sojae	4e-11	70.1	356	26.12
PP00085G00680	Physcomitrella patens	3e-10	67.4	340	26.18
phs176300	Phytophtora sojae	7e-09	63.2	321	26.48
OS03G02700	Oryza sativa	2e-06	55.1	152	25.66
PP03962G00010	Physcomitrella patens	3e-06	52.8	204	25.00

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
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