Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
OS02G58480	Oryza sativa	0.0	1766	847	100.00
OS04G24430	Oryza sativa	0.0	1412	846	79.20
OS04G17650	Oryza sativa	0.0	1310	758	82.19
ATR_00044G00210	Amborella trichopoda	0.0	1187	833	66.63
AT1G73370	Arabidopsis thaliana	0.0	1159	844	64.81
AT5G37180	Arabidopsis thaliana	0.0	1107	801	64.67
ATR_00106G00050	Amborella trichopoda	0.0	983	809	58.59
OS03G22120	Oryza sativa	0.0	964	803	58.16
AT4G02280	Arabidopsis thaliana	0.0	952	807	56.51
OS06G09450	Oryza sativa	0.0	918	807	55.14
AT5G49190	Arabidopsis thaliana	0.0	913	801	55.06
PP00028G02030	Physcomitrella patens	0.0	911	821	53.23
OS03G28330	Oryza sativa	0.0	900	803	53.92
AT3G43190	Arabidopsis thaliana	0.0	898	808	54.58
PP00303G00240	Physcomitrella patens	0.0	893	805	54.16
AT5G20830	Arabidopsis thaliana	0.0	892	803	55.17
OS07G42490	Oryza sativa	0.0	892	804	53.86
PP00093G00500	Physcomitrella patens	0.0	885	807	53.41
PP00120G00370	Physcomitrella patens	0.0	878	805	52.17
CV00G95450	Coccomyxa subellipsoidea C-169	0.0	772	750	51.33
RCC4223.04g06590	Picochlorum_RCC4223	0.0	758	802	47.26
PI00G03370	Picochlorum sp. SENEW3 (SE3)	0.0	756	798	47.12
HE0000G56330	Helicosporidium sp.	0.0	728	771	47.21
CNC64A_002G04500	Chlorella sp NC64A	0.0	654	732	46.99
AC00G61310	Asterochloris sp. Cgr-DA1pho v2.0	0.0	642	801	42.82
AP00G37470	Auxenochlorella protothecoides	0.0	585	523	53.92
AP00G37480	Auxenochlorella protothecoides	2e-88	294	391	41.94
AC00G44410	Asterochloris sp. Cgr-DA1pho v2.0	1e-40	162	553	28.03
ATR_00099G00850	Amborella trichopoda	3e-36	152	586	25.09
PP00131G00600	Physcomitrella patens	4e-36	151	531	27.31
OS01G69030	Oryza sativa	4e-36	151	535	27.48
PP00066G01210	Physcomitrella patens	6e-36	151	532	27.44
ATR_00033G01740	Amborella trichopoda	7e-36	150	523	28.49
AT1G04920	Arabidopsis thaliana	8e-36	150	666	25.23
OS08G20660	Oryza sativa	3e-35	149	557	27.47
OS02G09170	Oryza sativa	4e-35	148	536	26.68
OS06G43630	Oryza sativa	4e-34	145	540	27.04
AT4G10120	Arabidopsis thaliana	9e-34	144	528	27.08
AT5G11110	Arabidopsis thaliana	1e-33	143	547	26.87
OS11G12810	Oryza sativa	4e-32	139	581	25.65
AT5G20280	Arabidopsis thaliana	9e-31	134	550	25.27
gsu138950	Galdieria sulphuraria	4e-30	132	500	27.20
AP00G64190	Auxenochlorella protothecoides	7e-29	128	577	24.61
RCC4223.05g02250	Picochlorum_RCC4223	2e-26	120	285	32.63
PI00G14670	Picochlorum sp. SENEW3 (SE3)	1e-25	118	285	32.28
CNC64A_014G03230	Chlorella sp NC64A	4e-23	108	193	34.72
CR12G08850	Chlamydomonas reinhardtii	1e-20	102	201	33.33
HE0000G57540	Helicosporidium sp.	2e-20	100	191	34.03
CV00G68630	Coccomyxa subellipsoidea C-169	6e-19	96.7	222	31.98
ccr138580	Chondrus crispus	3e-10	67.4	206	27.67
CM20G01680	Cyanidioschyzon merolae	2e-09	65.1	241	24.48
DDB_G0272730	Dictyostelium discoideum	2e-08	61.2	166	25.30
ES0097G00100	Ectocarpus siliculosus	1e-06	55.8	197	25.38
WBGene00017282	Caenorhabditis elegans	4e-06	54.3	230	23.04
phs317530	Phytophtora sojae	9e-06	53.1	208	27.88

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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