Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
ATR_00025G03910	Amborella trichopoda	0.0	1107	543	100.00
AT1G73050	Arabidopsis thaliana	0.0	576	521	58.35
OS06G44540	Oryza sativa	2e-169	500	544	51.84
ATR_00069G01340	Amborella trichopoda	1e-154	462	565	47.08
AT1G12570	Arabidopsis thaliana	2e-150	451	546	47.62
OS10G38050	Oryza sativa	6e-149	447	554	48.01
OS04G48400	Oryza sativa	1e-146	442	555	47.75
AT1G72970	Arabidopsis thaliana	1e-145	439	539	46.38
AT5G51950	Arabidopsis thaliana	3e-145	438	573	45.38
OS09G19930	Oryza sativa	4e-142	430	550	46.36
PP00078G00400	Physcomitrella patens	7e-142	429	539	46.38
OS02G45530	Oryza sativa	8e-142	429	559	47.05
OS08G31030	Oryza sativa	1e-140	426	568	43.13
AT3G56060	Arabidopsis thaliana	2e-139	422	545	44.77
ATR_00036G00190	Amborella trichopoda	3e-139	422	536	45.15
ATR_00028G00950	Amborella trichopoda	2e-138	410	244	82.79
ATR_00028G00930	Amborella trichopoda	3e-138	409	244	83.20
PP00003G02580	Physcomitrella patens	5e-137	417	564	45.21
OS03G02700	Oryza sativa	3e-132	404	566	43.64
PP00085G00680	Physcomitrella patens	1e-129	398	573	44.68
AT5G51930	Arabidopsis thaliana	4e-126	388	539	43.41
AT1G14190	Arabidopsis thaliana	1e-125	384	522	43.87
AT1G14185	Arabidopsis thaliana	2e-123	379	519	42.77
PP00078G00390	Physcomitrella patens	1e-116	360	515	42.33
PP00472G00030	Physcomitrella patens	3e-104	328	531	39.36
ATR_00028G00960	Amborella trichopoda	2e-102	314	206	78.64
ATR_00028G00940	Amborella trichopoda	1e-82	262	207	68.60
ATR_00028G00970	Amborella trichopoda	1e-48	174	105	80.95
phs197510	Phytophtora sojae	1e-39	156	572	29.02
ATR_00010G04850	Amborella trichopoda	8e-37	144	419	29.36
ES0003G00250	Ectocarpus siliculosus	1e-36	147	566	27.92
CNC64A_037G00370	Chlorella sp NC64A	4e-36	145	564	31.03
FC007G06160	Fragilariopsis cylindrus	3e-34	140	580	26.72
FBgn0030590	Drosophila melanogaster	6e-34	140	599	29.55
FBgn0266435	Drosophila melanogaster	6e-33	136	584	28.08
FBgn0030596	Drosophila melanogaster	7e-33	136	604	27.81
phs198930	Phytophtora sojae	1e-32	136	564	28.19
CV00G70600	Coccomyxa subellipsoidea C-169	2e-32	135	575	29.22
VC00G100730	Volvox carteri	4e-32	134	600	27.83
ENSG00000016391	Homo sapiens	7e-32	133	570	28.42
phs198830	Phytophtora sojae	1e-31	132	560	28.57
AC00G81700	Asterochloris sp. Cgr-DA1pho v2.0	4e-31	131	627	27.59
FBgn0030592	Drosophila melanogaster	7e-31	131	593	27.66
emh310600	Emiliania huxleyi	3e-30	129	582	27.84
PTI_02G04580	Phaeodactylum tricornutum	3e-28	123	585	25.81
FBgn0030593	Drosophila melanogaster	4e-28	122	593	26.64
FBgn0030598	Drosophila melanogaster	1e-27	121	591	26.90
CR12G06760	Chlamydomonas reinhardtii	6e-27	119	586	26.79
emh610010	Emiliania huxleyi	1e-26	118	610	26.56
ATR_00028G00920	Amborella trichopoda	1e-25	106	62	72.58
FBgn0039415	Drosophila melanogaster	3e-25	114	579	25.73
FBgn0030594	Drosophila melanogaster	7e-24	109	572	24.83
FC027G00320	Fragilariopsis cylindrus	1e-23	108	574	23.52
FBgn0001112	Drosophila melanogaster	2e-23	108	565	25.13
emh197990	Emiliania huxleyi	3e-23	107	603	28.03
emh706340	Emiliania huxleyi	3e-23	107	603	28.03
RCC4223.04g05780	Picochlorum_RCC4223	9e-23	106	341	31.67
CM16G00880	Cyanidioschyzon merolae	1e-22	105	593	25.97
ccr36220	Chondrus crispus	3e-22	104	576	26.56
PI00G68540	Picochlorum sp. SENEW3 (SE3)	7e-22	103	342	30.12
FBgn0030597	Drosophila melanogaster	8e-22	103	595	27.73
FBgn0030588	Drosophila melanogaster	9e-22	103	324	32.41
Naga_100099g13	Nannochloropsis gaditana	3e-21	102	582	26.63
ccr175760	Chondrus crispus	1e-20	99.8	322	32.61
FBgn0030586	Drosophila melanogaster	1e-20	99.8	604	25.17
FBgn0030587	Drosophila melanogaster	5e-20	97.8	323	33.75
WBGene00007917	Caenorhabditis elegans	3e-19	95.1	562	24.02
FBgn0030589	Drosophila melanogaster	4e-19	94.7	322	31.68
emh381540	Emiliania huxleyi	7e-19	94.0	331	29.00
AA0010G01840	Aureococcus anophagefferens	5e-18	91.3	321	29.28
PTI_02G04520	Phaeodactylum tricornutum	5e-18	91.3	544	26.84
TP08G04640	Thalassiosira pseudonana	2e-17	89.0	511	23.48
FBgn0037896	Drosophila melanogaster	3e-17	89.0	349	27.51
phs157680	Phytophtora sojae	2e-15	83.6	606	23.76
OS05G49000	Oryza sativa	4e-15	80.1	79	56.96
gsu91210	Galdieria sulphuraria	9e-15	79.0	310	28.71
AA0058G00090	Aureococcus anophagefferens	2e-14	80.5	584	24.83
DDB_G0287229	Dictyostelium discoideum	6e-14	78.6	585	22.56
Naga_100040g2	Nannochloropsis gaditana	1e-13	77.0	327	25.99
FC014G01320	Fragilariopsis cylindrus	2e-13	77.0	411	24.33
Naga_100105g4	Nannochloropsis gaditana	5e-13	75.9	341	30.79
AA0005G05800	Aureococcus anophagefferens	1e-12	74.7	468	25.00
PI00G66040	Picochlorum sp. SENEW3 (SE3)	1e-12	74.3	551	22.87
ccr51120	Chondrus crispus	1e-11	71.6	341	30.50
AA0005G05600	Aureococcus anophagefferens	1e-11	67.8	145	36.55
Naga_100004g95	Nannochloropsis gaditana	1e-11	71.6	400	27.00
emh751500	Emiliania huxleyi	4e-09	63.2	580	24.83
RCC4223.08g04290	Picochlorum_RCC4223	4e-09	63.2	332	25.90
Naga_100225g10	Nannochloropsis gaditana	7e-09	62.4	561	25.67
ES0475G00020	Ectocarpus siliculosus	1e-08	61.6	326	24.85
phs172930	Phytophtora sojae	2e-08	60.5	162	29.01
gsu91190	Galdieria sulphuraria	1e-06	54.3	107	36.45

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment