Interactive Phylogenetics Module

Gene Id
AT5G03540

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism E-value Bitscore Alignment Length Identity Percentage
AT5G03540 Arabidopsis thaliana 0.0 1375 665 100.00
ATR_00030G01540 Amborella trichopoda 0.0 978 676 71.75
AT5G52340 Arabidopsis thaliana 0.0 939 666 70.27
OS11G05880 Oryza sativa 0.0 912 659 68.44
OS04G58880 Oryza sativa 0.0 855 656 64.18
PP00039G00280 Physcomitrella patens 0.0 734 669 57.25
PP00036G00610 Physcomitrella patens 0.0 660 669 53.36
PP00059G01140 Physcomitrella patens 0.0 644 670 52.09
AT5G52350 Arabidopsis thaliana 0.0 596 487 60.16
PP00070G00130 Physcomitrella patens 3e-137 425 700 36.43
PP00169G00210 Physcomitrella patens 7e-135 418 659 36.42
PP00142G00350 Physcomitrella patens 3e-133 415 684 36.40
PP00376G00390 Physcomitrella patens 6e-133 414 469 45.20
PP00177G00690 Physcomitrella patens 3e-119 378 471 40.76
AT5G50380 Arabidopsis thaliana 2e-111 357 676 33.43
ATR_00013G01310 Amborella trichopoda 2e-110 355 696 33.91
OS04G31330 Oryza sativa 2e-110 355 673 32.69
AT1G72470 Arabidopsis thaliana 2e-108 348 453 41.06
PP00227G00350 Physcomitrella patens 7e-107 345 707 33.95
OS01G69230 Oryza sativa 3e-106 343 528 37.69
AT5G58430 Arabidopsis thaliana 8e-106 341 662 33.38
ATR_00131G00790 Amborella trichopoda 3e-105 339 451 39.02
ATR_00023G00340 Amborella trichopoda 4e-104 337 680 31.76
AT3G14090 Arabidopsis thaliana 2e-103 334 560 34.64
ATR_00153G00510 Amborella trichopoda 2e-101 330 435 40.69
OS09G26820 Oryza sativa 3e-101 329 472 40.68
AT1G54090 Arabidopsis thaliana 2e-99 324 448 38.84
OS04G58870 Oryza sativa 2e-99 321 294 53.06
ATR_00154G00130 Amborella trichopoda 9e-98 320 673 32.99
ATR_00034G00470 Amborella trichopoda 8e-93 306 627 31.26
OS02G30230 Oryza sativa 4e-92 306 679 31.52
PP00080G00500 Physcomitrella patens 9e-90 300 638 31.03
AT5G13990 Arabidopsis thaliana 9e-90 300 574 32.23
OS11G06700 Oryza sativa 1e-87 295 451 34.37
PP00097G00450 Physcomitrella patens 1e-86 291 711 29.11
OS08G41820 Oryza sativa 5e-85 285 442 36.65
AT5G13150 Arabidopsis thaliana 5e-85 286 456 34.21
AC00G31160 Asterochloris sp. Cgr-DA1pho v2.0 1e-83 283 678 28.61
OS12G06840 Oryza sativa 2e-83 283 546 31.50
OS05G39610 Oryza sativa 8e-82 278 613 28.55
PP00038G01650 Physcomitrella patens 8e-82 278 668 28.44
AT1G07000 Arabidopsis thaliana 2e-81 276 621 29.31
AT3G29400 Arabidopsis thaliana 2e-80 275 675 30.22
AT2G28640 Arabidopsis thaliana 2e-75 259 442 32.13
OS01G55799 Oryza sativa 3e-74 256 446 34.30
AT1G07725 Arabidopsis thaliana 3e-73 254 472 30.08
AT5G59730 Arabidopsis thaliana 2e-72 252 441 31.97
OS01G61180 Oryza sativa 2e-72 252 609 26.60
AT5G61010 Arabidopsis thaliana 6e-72 251 459 31.59
CV00G21770 Coccomyxa subellipsoidea C-169 4e-69 244 713 27.21
AT4G31540 Arabidopsis thaliana 7e-69 243 699 27.18
AT2G39380 Arabidopsis thaliana 9e-69 242 619 26.01
ATR_00019G03960 Amborella trichopoda 1e-66 237 450 33.11
AT3G09520 Arabidopsis thaliana 4e-66 234 454 29.30
AT3G55150 Arabidopsis thaliana 2e-62 225 446 26.68
OS02G05620 Oryza sativa 3e-62 225 454 30.62
AT3G09530 Arabidopsis thaliana 4e-62 224 448 30.13
OS06G48330 Oryza sativa 3e-60 219 661 25.42
PP00006G02120 Physcomitrella patens 4e-59 216 683 26.65
OS06G14450 Oryza sativa 7e-58 207 430 33.26
OS01G61190 Oryza sativa 3e-54 200 604 26.66
AT2G28650 Arabidopsis thaliana 9e-53 196 396 29.55
ATR_00065G01290 Amborella trichopoda 8e-49 186 397 29.72
CNC64A_005G01120 Chlorella sp NC64A 4e-43 169 473 26.22
OS12G01040 Oryza sativa 1e-41 162 469 26.87
OS11G01050 Oryza sativa 1e-41 162 469 26.87
AT1G51640 Arabidopsis thaliana 2e-37 151 387 28.94
OS01G67820 Oryza sativa 3e-36 147 448 26.12
ENSG00000182473 Homo sapiens 4e-32 136 395 28.10
ENSMUSG00000020792 Mus musculus 1e-31 135 403 27.79
OS07G10910 Oryza sativa 3e-31 134 442 24.66
OS03G33520 Oryza sativa 5e-31 132 320 27.81
OS10G33850 Oryza sativa 8e-28 120 225 32.00
OS08G40840 Oryza sativa 5e-25 114 429 24.94
OS11G42989 Oryza sativa 5e-23 107 320 26.56
OS11G43049 Oryza sativa 5e-23 107 320 26.56
FBgn0266667 Drosophila melanogaster 5e-22 105 294 27.21
OS02G36619 Oryza sativa 6e-22 104 443 21.22
OS07G10960 Oryza sativa 1e-21 103 332 22.59
CR10G00900 Chlamydomonas reinhardtii 7e-19 95.1 210 30.95
OS01G28600 Oryza sativa 2e-18 93.6 452 23.01
OS07G10920 Oryza sativa 6e-18 89.4 326 23.93
phs167180 Phytophtora sojae 4e-16 85.9 272 27.94
OS06G08460 Oryza sativa 1e-15 84.0 331 23.26
ATR_00009G01630 Amborella trichopoda 2e-13 72.0 89 42.70
VC00G135380 Volvox carteri 5e-13 76.6 166 30.72
DDB_G0272991 Dictyostelium discoideum 6e-13 76.3 444 21.85
OS04G02070 Oryza sativa 5e-12 72.8 435 21.38
OS07G10940 Oryza sativa 1e-11 72.0 444 22.07
OS07G10970 Oryza sativa 2e-11 70.1 281 23.49
WBGene00016606 Caenorhabditis elegans 1e-10 68.9 275 22.91
Naga_100077g3 Nannochloropsis gaditana 1e-10 68.9 209 22.49
OS08G13570 Oryza sativa 3e-10 67.0 470 23.62
PTI_13G01510 Phaeodactylum tricornutum 1e-08 62.8 239 25.52
PP00364G00180 Physcomitrella patens 1e-08 58.5 73 39.73
FC002G09490 Fragilariopsis cylindrus 4e-08 58.2 205 28.29
YJL085W Saccharomyces cerevisiae strain S288C 2e-07 58.5 159 24.53
MP01G00390 Micromonas pusilla strain CCMP1545 6e-07 57.0 147 24.49
ATR_00131G00780 Amborella trichopoda 7e-07 53.9 83 24.10
OS09G17810 Oryza sativa 6e-06 53.5 330 22.12

Amborella trichopoda (11 genes)
Arabidopsis thaliana (23 genes)
Asterochloris sp. Cgr-DA1pho v2.0 (1 genes)
Aureococcus anophagefferens (0 genes)
Auxenochlorella protothecoides (0 genes)
Bathycoccus prasinos (0 genes)
Caenorhabditis elegans (1 genes)
Chlamydomonas reinhardtii (1 genes)
Chlorella sp NC64A (1 genes)
Chondrus crispus (0 genes)
Coccomyxa subellipsoidea C-169 (1 genes)
Cyanidioschyzon merolae (0 genes)
Dictyostelium discoideum (1 genes)
Drosophila melanogaster (1 genes)
Ectocarpus siliculosus (0 genes)
Emiliania huxleyi (0 genes)
Fragilariopsis cylindrus (1 genes)
Galdieria sulphuraria (0 genes)
Helicosporidium sp. (0 genes)
Homo sapiens (1 genes)
Micromonas pusilla strain CCMP1545 (1 genes)
Micromonas sp RCC299 (0 genes)
Mus musculus (1 genes)
Nannochloropsis gaditana (1 genes)
Oryza sativa (36 genes)
Ostreococcus lucimarinus (0 genes)
Ostreococcus mediterraneus (0 genes)
Ostreococcus sp RCC809 (0 genes)
Ostreococcus tauri (0 genes)
Paramecium tetraurelia (0 genes)
Phaeodactylum tricornutum (1 genes)
Physcomitrella patens (14 genes)
Phytophtora sojae (1 genes)
Picochlorum sp. SENEW3 (SE3) (0 genes)
Picochlorum_RCC4223 (0 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (0 genes)
Thalassiosira pseudonana (0 genes)
Volvox carteri (1 genes)

Program Settings