Interactive Phylogenetics Module

Gene Id
AT4G39350

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism E-value Bitscore Alignment Length Identity Percentage
AT4G39350 Arabidopsis thaliana 0.0 2253 1085 100.00
AT2G21770 Arabidopsis thaliana 0.0 1944 1090 86.70
AT5G64740 Arabidopsis thaliana 0.0 1897 1089 84.57
AT5G09870 Arabidopsis thaliana 0.0 1850 1083 84.12
ATR_00017G02090 Amborella trichopoda 0.0 1687 1099 76.71
ATR_00022G00640 Amborella trichopoda 0.0 1620 1102 71.42
OS03G62090 Oryza sativa 0.0 1579 1098 70.86
OS07G24190 Oryza sativa 0.0 1576 1100 70.36
OS07G14850 Oryza sativa 0.0 1550 1101 71.30
PP00030G00170 Physcomitrella patens 0.0 1504 1095 67.67
PP00029G01150 Physcomitrella patens 0.0 1504 1101 67.12
PP00090G01250 Physcomitrella patens 0.0 1478 1110 65.77
ATR_00137G00140 Amborella trichopoda 0.0 1469 1103 65.55
ATR_00103G00760 Amborella trichopoda 0.0 1457 1086 65.38
ATR_00081G00760 Amborella trichopoda 0.0 1453 1099 65.61
PP00112G00250 Physcomitrella patens 0.0 1448 1101 66.67
OS09G25490 Oryza sativa 0.0 1445 1107 65.22
OS05G08370 Oryza sativa 0.0 1427 1105 63.98
AT5G17420 Arabidopsis thaliana 0.0 1425 1086 64.00
OS07G10770 Oryza sativa 0.0 1420 1100 63.36
AT4G32410 Arabidopsis thaliana 0.0 1410 1086 63.72
OS03G59340 Oryza sativa 0.0 1400 1078 63.73
AT5G05170 Arabidopsis thaliana 0.0 1393 1075 62.70
ATR_00067G02090 Amborella trichopoda 0.0 1390 1063 63.59
AT2G25540 Arabidopsis thaliana 0.0 1381 1082 61.37
PP00213G00010 Physcomitrella patens 0.0 1360 941 69.29
AT5G44030 Arabidopsis thaliana 0.0 1349 1082 60.17
OS01G54620 Oryza sativa 0.0 1250 1040 59.04
ATR_00170G00010 Amborella trichopoda 0.0 1242 873 67.81
AT4G18780 Arabidopsis thaliana 0.0 1233 1060 57.36
ATR_00045G01550 Amborella trichopoda 0.0 1132 878 61.39
PP00008G00780 Physcomitrella patens 0.0 989 793 64.31
ATR_00002G02960 Amborella trichopoda 0.0 906 661 65.96
PP00189G00480 Physcomitrella patens 0.0 830 587 69.68
PP00189G00510 Physcomitrella patens 0.0 830 587 69.68
ATR_00048G00590 Amborella trichopoda 0.0 842 901 48.28
PP00310G00070 Physcomitrella patens 0.0 838 1116 42.56
AT3G03050 Arabidopsis thaliana 0.0 837 932 47.32
OS06G02180 Oryza sativa 0.0 837 888 48.42
PP00111G00250 Physcomitrella patens 0.0 834 890 48.65
PP00057G00480 Physcomitrella patens 0.0 830 893 48.15
PP00243G00060 Physcomitrella patens 0.0 820 897 48.16
PP00111G00180 Physcomitrella patens 0.0 820 889 48.03
AT5G16910 Arabidopsis thaliana 0.0 818 892 47.42
AT1G02730 Arabidopsis thaliana 0.0 818 899 48.50
PP00269G00120 Physcomitrella patens 0.0 815 889 48.37
OS10G42750 Oryza sativa 0.0 815 908 46.37
PP00243G00010 Physcomitrella patens 0.0 813 889 48.48
AT4G38190 Arabidopsis thaliana 0.0 805 976 45.08
AT2G33100 Arabidopsis thaliana 0.0 801 916 46.07
ATR_00019G03800 Amborella trichopoda 0.0 795 880 47.61
OS06G39970 Oryza sativa 0.0 786 848 48.35
ATR_00022G01210 Amborella trichopoda 0.0 795 930 46.02
OS12G36890 Oryza sativa 0.0 793 1116 42.03
AT1G32180 Arabidopsis thaliana 0.0 767 909 44.44
PP00068G00840 Physcomitrella patens 0.0 763 888 46.06
OS10G32980 Oryza sativa 0.0 748 628 61.15
OS06G22980 Oryza sativa 0.0 742 899 44.16
PP00059G01570 Physcomitrella patens 0.0 723 570 62.98
OS08G25710 Oryza sativa 0.0 706 886 44.47
OS08G06380 Oryza sativa 0.0 612 859 39.81
OS07G36630 Oryza sativa 0.0 597 846 38.65
OS07G36610 Oryza sativa 0.0 580 884 38.46
OS07G36700 Oryza sativa 0.0 565 840 38.81
OS07G36690 Oryza sativa 0.0 563 868 37.90
ATR_00057G00940 Amborella trichopoda 0.0 550 578 47.75
OS07G36750 Oryza sativa 3e-178 551 866 37.76
OS07G36740 Oryza sativa 7e-177 548 870 38.51
ATR_00017G00080 Amborella trichopoda 4e-132 424 753 34.26
ATR_00017G01730 Amborella trichopoda 4e-124 405 770 33.12
OS10G20260 Oryza sativa 8e-116 384 877 32.95
OS10G20090 Oryza sativa 1e-113 376 835 31.38
AT2G32530 Arabidopsis thaliana 3e-113 375 807 31.72
AT2G32620 Arabidopsis thaliana 6e-113 374 770 32.60
AT2G32540 Arabidopsis thaliana 8e-111 369 793 31.27
AT2G32610 Arabidopsis thaliana 7e-110 366 803 31.63
PP00059G01580 Physcomitrella patens 8e-106 338 252 65.87
AT4G15290 Arabidopsis thaliana 5e-103 348 789 30.67
AT4G15320 Arabidopsis thaliana 1e-90 315 794 30.48
ATR_00061G02350 Amborella trichopoda 5e-88 305 397 40.55
OS04G35020 Oryza sativa 1e-85 299 777 29.21
OS09G30120 Oryza sativa 6e-85 297 366 40.98
AT1G55850 Arabidopsis thaliana 3e-83 292 407 40.05
OS09G30130 Oryza sativa 2e-82 289 384 40.62
ATR_00002G02970 Amborella trichopoda 3e-78 259 186 68.82
OS02G49332 Oryza sativa 4e-78 277 379 39.31
ATR_00021G02120 Amborella trichopoda 9e-73 261 342 41.52
ATR_00057G00930 Amborella trichopoda 4e-71 253 378 42.59
AT4G24010 Arabidopsis thaliana 4e-70 254 384 36.98
AT4G23990 Arabidopsis thaliana 9e-68 247 382 35.60
AT4G24000 Arabidopsis thaliana 1e-67 246 383 35.77
ATR_00017G00110 Amborella trichopoda 9e-60 219 261 45.98
PP00189G00490 Physcomitrella patens 5e-54 195 270 44.81
ATR_00061G02330 Amborella trichopoda 6e-45 176 331 31.42
PP00015G00170 Physcomitrella patens 8e-44 160 102 73.53
OS12G29300 Oryza sativa 5e-42 160 148 53.38
OS04G35030 Oryza sativa 6e-40 158 355 29.58
PP00213G00020 Physcomitrella patens 3e-34 135 99 58.59
PP00189G00520 Physcomitrella patens 4e-29 121 93 58.06
PP00120G00840 Physcomitrella patens 2e-27 114 95 58.95
OS09G30105 Oryza sativa 7e-22 102 105 45.71
ATR_00061G02320 Amborella trichopoda 3e-19 89.7 66 56.06
ATR_00067G02080 Amborella trichopoda 2e-15 80.5 45 68.89
OS07G36680 Oryza sativa 4e-15 80.9 80 52.50
Naga_100049g27 Nannochloropsis gaditana 3e-11 71.6 204 25.49
Naga_100079g22 Nannochloropsis gaditana 7e-11 70.5 192 29.17
ccr65060 Chondrus crispus 6e-09 64.3 147 29.93
DDB_G0269124 Dictyostelium discoideum 6e-09 64.3 134 32.09
ccr122880 Chondrus crispus 1e-07 60.5 151 29.14
PI00G60790 Picochlorum sp. SENEW3 (SE3) 3e-07 58.9 135 28.89
phs115390 Phytophtora sojae 4e-07 58.5 308 24.35
PP00213G00500 Physcomitrella patens 8e-07 53.5 52 36.54
ES0231G00120 Ectocarpus siliculosus 1e-06 57.0 166 25.90
AC00G28500 Asterochloris sp. Cgr-DA1pho v2.0 1e-06 56.6 138 27.54
PP00372G00370 Physcomitrella patens 2e-06 55.8 122 31.15
OS06G11050 Oryza sativa 4e-06 54.7 59 54.24
RCC4223.02g07700 Picochlorum_RCC4223 5e-06 54.7 233 26.18
phs114790 Phytophtora sojae 8e-06 54.3 594 22.73

Amborella trichopoda (23 genes)
Arabidopsis thaliana (26 genes)
Asterochloris sp. Cgr-DA1pho v2.0 (1 genes)
Aureococcus anophagefferens (0 genes)
Auxenochlorella protothecoides (0 genes)
Bathycoccus prasinos (0 genes)
Caenorhabditis elegans (0 genes)
Chlamydomonas reinhardtii (0 genes)
Chlorella sp NC64A (0 genes)
Chondrus crispus (2 genes)
Coccomyxa subellipsoidea C-169 (0 genes)
Cyanidioschyzon merolae (0 genes)
Dictyostelium discoideum (1 genes)
Drosophila melanogaster (0 genes)
Ectocarpus siliculosus (1 genes)
Emiliania huxleyi (0 genes)
Fragilariopsis cylindrus (0 genes)
Galdieria sulphuraria (0 genes)
Helicosporidium sp. (0 genes)
Homo sapiens (0 genes)
Micromonas pusilla strain CCMP1545 (0 genes)
Micromonas sp RCC299 (0 genes)
Mus musculus (0 genes)
Nannochloropsis gaditana (2 genes)
Oryza sativa (33 genes)
Ostreococcus lucimarinus (0 genes)
Ostreococcus mediterraneus (0 genes)
Ostreococcus sp RCC809 (0 genes)
Ostreococcus tauri (0 genes)
Paramecium tetraurelia (0 genes)
Phaeodactylum tricornutum (0 genes)
Physcomitrella patens (25 genes)
Phytophtora sojae (2 genes)
Picochlorum sp. SENEW3 (SE3) (1 genes)
Picochlorum_RCC4223 (1 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Thalassiosira pseudonana (0 genes)
Volvox carteri (0 genes)

Program Settings