Gene: AT5G05170 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G05170
Transcript Identifier
AT5G05170.1
Gene Type
Coding gene
Location
5 : 1530401-1535090 : negative

Family Information

Homologous gene family
HOM03P000414
(109 genes in 4 species)
specific family
Orthologous gene family
ORTHO03P000146
(70 genes in 4 species)
specific family

Descriptions

Identifiers

Type Value

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009834
IMP
Gene Ontologyplant-type secondary cell wall biogenesis1 2
GO:0009833
IMP
TAS
Gene Ontologyplant-type primary cell wall biogenesis3 4 5 6
GO:0030244
IMP
Gene Ontologycellulose biosynthetic process5 6 7 8
GO:0009809
IGI
Gene Ontologylignin biosynthetic process9 10
GO:0043255
IGI
Gene Ontologyregulation of carbohydrate biosynthetic process9 10
GO:0006952
TAS
Gene Ontologydefense response11 12
GO:0000271
RCA
Gene Ontologypolysaccharide biosynthetic process13 14
GO:0006096
RCA
Gene Ontologyglycolytic process13 14
GO:0006816
RCA
Gene Ontologycalcium ion transport13 14
GO:0006833
RCA
Gene Ontologywater transport13 14
GO:0006972
RCA
Gene Ontologyhyperosmotic response13 14
GO:0007030
RCA
Gene OntologyGolgi organization13 14
GO:0007389
RCA
Gene Ontologypattern specification process13 14
GO:0008361
RCA
Gene Ontologyregulation of cell size13 14
GO:0009266
RCA
Gene Ontologyresponse to temperature stimulus13 14
GO:0009651
RCA
Gene Ontologyresponse to salt stress13 14
GO:0009750
RCA
Gene Ontologyresponse to fructose13 14
GO:0009825
RCA
Gene Ontologymultidimensional cell growth13 14
GO:0009832
RCA
Gene Ontologyplant-type cell wall biogenesis13 14
GO:0009926
RCA
Gene Ontologyauxin polar transport13 14
GO:0009932
RCA
Gene Ontologycell tip growth13 14
GO:0010015
RCA
Gene Ontologyroot morphogenesis13 14
GO:0010817
RCA
Gene Ontologyregulation of hormone levels13 14
GO:0016049
RCA
Gene Ontologycell growth13 14
GO:0016126
RCA
Gene Ontologysterol biosynthetic process13 14
GO:0030243
RCA
Gene Ontologycellulose metabolic process13 14
GO:0040007
RCA
Gene Ontologygrowth13 14
GO:0042546
RCA
Gene Ontologycell wall biogenesis13 14
GO:0043481
RCA
Gene Ontologyanthocyanin accumulation in tissues in response to UV light13 14
GO:0046686
RCA
Gene Ontologyresponse to cadmium ion13 14
GO:0048767
RCA
Gene Ontologyroot hair elongation13 14
GO:0071555
RCA
Gene Ontologycell wall organization13 14

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016757
ISS
Gene Ontologytransferase activity, transferring glycosyl groups15
GO:0016759
IMP
ISS
Gene Ontologycellulose synthase activity7 8 16

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
IDA
ISM
TAS
Gene Ontologyplasma membrane17 18 19 20 21 22 23
GO:0005794
IDA
Gene OntologyGolgi apparatus24 25 26 27 28 29
GO:0009506
IDA
Gene Ontologyplasmodesma30 31
GO:0005768
IDA
Gene Ontologyendosome28 29
GO:0005802
IDA
Gene Ontologytrans-Golgi network28 29

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001841Zinc finger, RING-type
IPR005150Cellulose synthase
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR027934Cellulose synthase, RING-type zinc finger
IPR029044Nucleotide-diphospho-sugar transferases

No MapMan annotations defined for this gene.