Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
AT4G35770	Arabidopsis thaliana	4e-134	380	183	100.00
OS06G50930	Oryza sativa	4e-50	166	125	61.60
AT5G66040	Arabidopsis thaliana	1e-46	155	118	61.86
ATR_00001G01640	Amborella trichopoda	1e-45	152	112	60.71
PP00081G00640	Physcomitrella patens	5e-39	138	109	55.96
PP00001G00600	Physcomitrella patens	3e-35	129	110	53.64
AT5G66170	Arabidopsis thaliana	6e-28	107	113	44.25
ATR_00018G01210	Amborella trichopoda	3e-27	108	111	45.95
OS04G17660	Oryza sativa	1e-26	104	112	42.86
OS02G01220	Oryza sativa	5e-26	102	110	42.73
VC00G87170	Volvox carteri	1e-24	99.8	119	40.34
CR10G05780	Chlamydomonas reinhardtii	8e-24	97.1	132	39.39
AT2G21045	Arabidopsis thaliana	9e-24	97.4	130	36.15
AT2G17850	Arabidopsis thaliana	7e-22	92.0	112	39.29
gsu13530	Galdieria sulphuraria	1e-21	90.5	110	36.36
CNC64A_016G01400	Chlorella sp NC64A	2e-20	86.7	100	40.00
gsu98730	Galdieria sulphuraria	8e-19	84.0	111	36.04
ES0080G00090	Ectocarpus siliculosus	3e-18	81.3	103	37.86
RCC4223.02g11355	Picochlorum_RCC4223	5e-18	82.4	118	37.29
OS02G06290	Oryza sativa	2e-17	80.5	100	40.00
PI00G38740	Picochlorum sp. SENEW3 (SE3)	2e-17	80.5	157	31.21
ccr141380	Chondrus crispus	3e-16	79.0	94	40.43
BPRRCC1105_08G04060	Bathycoccus prasinos	5e-15	73.6	99	41.41
CNC64A_016G01410	Chlorella sp NC64A	7e-15	72.4	114	37.72
AC00G80510	Asterochloris sp. Cgr-DA1pho v2.0	8e-14	70.1	104	36.54
CM17G04660	Cyanidioschyzon merolae	2e-13	69.3	96	38.54
OS12G24020	Oryza sativa	3e-13	68.2	101	39.60
AA0005G02070	Aureococcus anophagefferens	5e-13	66.2	92	32.61
CV00G82930	Coccomyxa subellipsoidea C-169	8e-12	63.5	106	31.13
CNC64A_016G01370	Chlorella sp NC64A	2e-11	62.4	99	34.34
HE0000G54400	Helicosporidium sp.	1e-10	59.7	91	31.87
AP00G06010	Auxenochlorella protothecoides	2e-10	59.3	110	31.82
CV00G11240	Coccomyxa subellipsoidea C-169	2e-09	58.9	171	27.49
AT4G27700	Arabidopsis thaliana	7e-09	56.6	145	30.34
HE0000G46360	Helicosporidium sp.	2e-08	53.9	111	30.63
ATR_00027G00800	Amborella trichopoda	4e-08	54.7	144	29.86
VC00G43040	Volvox carteri	1e-07	53.5	106	33.02
CR13G02680	Chlamydomonas reinhardtii	7e-07	51.2	106	33.96
CR13G07240	Chlamydomonas reinhardtii	1e-06	51.2	118	26.27
AC00G64880	Asterochloris sp. Cgr-DA1pho v2.0	2e-06	50.1	115	33.91
AC00G71800	Asterochloris sp. Cgr-DA1pho v2.0	2e-06	50.4	123	26.02
AP00G25030	Auxenochlorella protothecoides	7e-06	48.5	162	26.54

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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