Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
AT3G07020	Arabidopsis thaliana	0.0	1306	638	100.00
OS04G04254	Oryza sativa	0.0	843	570	72.11
OS07G23740	Oryza sativa	0.0	772	578	65.05
ATR_00039G01530	Amborella trichopoda	0.0	768	477	78.20
PP00281G00140	Physcomitrella patens	0.0	673	536	63.99
PP00159G00310	Physcomitrella patens	0.0	663	591	58.71
PP00110G00380	Physcomitrella patens	0.0	659	593	58.01
PP00245G00310	Physcomitrella patens	0.0	655	494	64.78
PP00090G00650	Physcomitrella patens	0.0	648	483	63.98
ATR_00040G00350	Amborella trichopoda	0.0	642	508	60.43
AT1G43620	Arabidopsis thaliana	0.0	610	498	56.63
OS01G64750	Oryza sativa	0.0	609	485	57.94
OS04G04240	Oryza sativa	3e-154	456	290	74.48
AC00G94040	Asterochloris sp. Cgr-DA1pho v2.0	1e-153	457	433	51.04
phs167020	Phytophtora sojae	1e-123	406	558	43.91
phs98350	Phytophtora sojae	5e-120	399	487	44.15
phs72670	Phytophtora sojae	2e-118	397	487	44.76
phs72690	Phytophtora sojae	2e-116	386	442	46.61
Naga_100022g16	Nannochloropsis gaditana	6e-114	378	469	43.50
AA0004G01710	Aureococcus anophagefferens	4e-106	337	450	41.78
PTI_17G01510	Phaeodactylum tricornutum	1e-104	343	435	41.84
FC004G08680	Fragilariopsis cylindrus	2e-99	320	460	39.13
phs99410	Phytophtora sojae	9e-93	314	485	37.53
phs99390	Phytophtora sojae	4e-92	301	405	42.22
phs166940	Phytophtora sojae	2e-76	273	405	40.25
DDB_G0288655	Dictyostelium discoideum	3e-73	263	459	34.42
YLR189C	Saccharomyces cerevisiae strain S288C	8e-72	256	434	35.94
phs08490	Phytophtora sojae	4e-63	218	302	42.38
AA0005G00200	Aureococcus anophagefferens	2e-55	195	284	39.44
CR07G05220	Chlamydomonas reinhardtii	1e-45	176	371	33.96
emh763250	Emiliania huxleyi	5e-45	171	455	30.77
CV00G63620	Coccomyxa subellipsoidea C-169	1e-44	162	187	47.06
FC001G15770	Fragilariopsis cylindrus	4e-26	110	174	36.78
TP15G02210	Thalassiosira pseudonana	2e-25	110	180	37.78
emh420080	Emiliania huxleyi	6e-25	109	231	36.80
CNC64A_006G03170	Chlorella sp NC64A	5e-23	107	261	32.18
ccr112280	Chondrus crispus	4e-22	103	486	25.10
emh621080	Emiliania huxleyi	5e-22	100	220	31.82
emh620950	Emiliania huxleyi	5e-22	100	220	31.82
AA0059G00270	Aureococcus anophagefferens	9e-22	99.8	185	33.51
DDB_G0268544	Dictyostelium discoideum	2e-21	101	399	25.31
DDB_G0268540	Dictyostelium discoideum	2e-21	100	398	24.87
FC001G15590	Fragilariopsis cylindrus	1e-20	97.1	204	33.33
phs99370	Phytophtora sojae	2e-20	99.0	290	30.69
Naga_100051g35	Nannochloropsis gaditana	5e-19	95.9	473	24.10
emh330090	Emiliania huxleyi	1e-17	90.1	405	25.19
AT5G24750	Arabidopsis thaliana	1e-17	90.5	509	23.18
emh190260	Emiliania huxleyi	1e-17	90.9	475	26.11
ATR_00078G01500	Amborella trichopoda	3e-17	89.4	215	28.84
VC00G90020	Volvox carteri	2e-16	84.0	71	47.89
OS02G11940	Oryza sativa	3e-16	85.5	394	22.84
emh248350	Emiliania huxleyi	2e-15	84.0	452	25.66
PP00131G00380	Physcomitrella patens	7e-12	72.4	233	25.32
phs166980	Phytophtora sojae	1e-10	67.4	288	24.31
CR07G01230	Chlamydomonas reinhardtii	5e-10	67.0	59	49.15
ES0029G00120	Ectocarpus siliculosus	7e-10	66.6	210	27.14
ccr80920	Chondrus crispus	1e-09	64.7	88	37.50
MP09G01500	Micromonas pusilla strain CCMP1545	2e-09	64.3	442	24.43
ccr05920	Chondrus crispus	6e-09	62.8	52	51.92
phs217180	Phytophtora sojae	8e-09	61.2	152	29.61
AA0006G05280	Aureococcus anophagefferens	1e-08	61.6	121	29.75
Naga_100501g3	Nannochloropsis gaditana	1e-07	58.9	62	46.77
AP00G02630	Auxenochlorella protothecoides	4e-07	57.0	105	35.24

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment