Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
AT1G14590	Arabidopsis thaliana	0.0	801	387	100.00
AT2G02061	Arabidopsis thaliana	7e-164	473	398	62.06
ATR_00044G00130	Amborella trichopoda	2e-150	437	359	58.50
OS04G49590	Oryza sativa	5e-137	402	285	62.46
OS02G46120	Oryza sativa	5e-135	400	284	61.27
ATR_00013G01760	Amborella trichopoda	1e-127	378	280	60.71
AT5G44820	Arabidopsis thaliana	1e-117	353	341	49.85
OS03G03730	Oryza sativa	2e-113	339	264	58.71
AT4G19970	Arabidopsis thaliana	1e-111	349	331	50.45
PP00068G00500	Physcomitrella patens	1e-108	330	290	54.83
PP00069G00220	Physcomitrella patens	2e-103	314	280	53.93
ATR_00048G01780	Amborella trichopoda	3e-101	315	362	45.30
AT4G15970	Arabidopsis thaliana	4e-101	311	296	51.35
PP00098G00890	Physcomitrella patens	1e-100	310	293	52.56
OS03G63270	Oryza sativa	2e-97	303	277	50.18
PP00068G00810	Physcomitrella patens	4e-93	292	277	50.90
PP00111G00220	Physcomitrella patens	8e-93	291	285	49.47
ATR_00002G01540	Amborella trichopoda	3e-86	272	258	51.16
OS07G19444	Oryza sativa	1e-85	273	290	43.45
OS08G41800	Oryza sativa	3e-84	267	344	41.86
OS01G69140	Oryza sativa	3e-82	262	268	42.91
OS01G69190	Oryza sativa	1e-78	253	278	40.29
OS01G69200	Oryza sativa	4e-78	252	282	41.49
OS03G63280	Oryza sativa	7e-75	244	269	42.01
OS01G69160	Oryza sativa	4e-72	236	258	43.80
AT1G28710	Arabidopsis thaliana	6e-66	219	294	41.84
AT1G28700	Arabidopsis thaliana	2e-64	215	261	42.53
AT1G28695	Arabidopsis thaliana	1e-61	208	291	40.55
OS03G52160	Oryza sativa	1e-58	201	256	42.58
AT5G40900	Arabidopsis thaliana	2e-51	181	268	35.07
OS01G69174	Oryza sativa	4e-18	87.0	80	45.00
AA0019G00300	Aureococcus anophagefferens	7e-10	64.7	174	30.46
PTI_29G01210	Phaeodactylum tricornutum	4e-09	62.4	248	23.79
PTI_29G01150	Phaeodactylum tricornutum	9e-09	61.2	248	23.39
CNC64A_001G00970	Chlorella sp NC64A	6e-08	58.5	196	23.98
AP00G27580	Auxenochlorella protothecoides	1e-07	57.8	129	32.56
CR07G07290	Chlamydomonas reinhardtii	2e-07	57.4	164	25.61
TP06G00540	Thalassiosira pseudonana	2e-07	57.0	229	25.33
VC00G45140	Volvox carteri	2e-07	56.6	258	24.42
VC00G65690	Volvox carteri	5e-07	55.8	207	25.60
Naga_100062g31	Nannochloropsis gaditana	6e-07	55.5	192	24.48
VC00G08800	Volvox carteri	6e-07	55.5	157	25.48
VC00G65670	Volvox carteri	2e-06	53.9	211	24.17
gsu122910	Galdieria sulphuraria	2e-06	53.5	124	28.23
AT1G70630	Arabidopsis thaliana	3e-06	53.1	173	24.86
CV00G88940	Coccomyxa subellipsoidea C-169	3e-06	51.2	107	32.71
FC003G11020	Fragilariopsis cylindrus	6e-06	52.4	181	24.86
AP00G61260	Auxenochlorella protothecoides	8e-06	51.6	155	27.10

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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