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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
YJR068W
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
YJR068W
Saccharomyces cerevisiae strain S288C
1.6e-200
699.9
354
100.0
SPAC23D3.02
Schizosaccharomyces pombe
1.1e-95
351.7
347
53.0
ENSG00000163918
Homo sapiens
1.1e-87
325.1
327
52.6
Ec-08_003900
Ectocarpus siliculosus
1.0e-85
318.5
335
49.6
AT1G21690
Arabidopsis thaliana
4.4e-81
303.1
327
50.5
Pp3c3_37360
Physcomitrella patens
3.7e-80
300.1
322
47.2
FBgn0030871
Drosophila melanogaster
9.2e-79
295.4
323
48.9
Cre06.g251800
Chlamydomonas reinhardtii
3.5e-78
293.5
330
48.8
tps141030
Thalassiosira pseudonana
1.7e-77
291.2
325
46.2
Ec-06_005100
Ectocarpus siliculosus
6.8e-74
279.3
333
45.0
gene10044
Fragilariopsis cylindrus
2.6e-73
277.3
329
43.8
CC00G176000
Cyclotella cryptica
3.4e-73
276.9
358
42.7
gsu138090
Galdieria sulphuraria
5.8e-73
276.2
336
44.3
pte233530
Paramecium tetraurelia
2.2e-72
274.2
328
40.9
Sro262_g102000
Seminavis robusta
3.2e-71
270.4
349
41.3
PSNMU-V1.4_AUG-EV-PASAV3_0059640
Pseudo-nitzschia multistriata
4.1e-71
270.0
368
39.9
sya00G173570
Synedra acus
2.1e-70
267.7
347
42.4
ptri219300
Phaeodactylum tricornutum
3.5e-70
266.9
357
41.2
ccr112700
Chondrus crispus
7.8e-70
265.8
355
40.8
emh282200
Emiliania huxleyi
1.2e-67
258.5
279
49.1
fso10320
Fistulifera solaris
1.4e-66
255.0
342
42.1
Naga_100080g2
Nannochloropsis gaditana
5.2e-66
253.1
223
57.0
fso131870
Fistulifera solaris
2.0e-65
251.1
344
40.1
tho127820
Thalassiosira oceanica
2.6e-65
250.8
349
42.1
gene20923
Fragilariopsis cylindrus
4.4e-65
250.0
306
43.1
Sro530_g161220
Seminavis robusta
1.1e-60
235.3
346
38.2
CM12G03070
Cyanidioschyzon merolae
1.2e-57
225.3
262
48.5
ps00G155250
Pseudo-nitzschia multiseries
2.0e-57
224.6
335
39.1
WBGene00018409
Caenorhabditis elegans
2.2e-56
221.1
322
39.8
WBGene00004340
Caenorhabditis elegans
2.9e-56
220.7
326
37.4
Pp3c13_4510
Physcomitrella patens
9.3e-55
215.7
325
40.3
ps00G185310
Pseudo-nitzschia multiseries
6.7e-53
209.5
337
36.5
PSNMU-V1.4_AUG-EV-PASAV3_0005500
Pseudo-nitzschia multistriata
1.1e-52
208.8
348
36.5
tps15640
Thalassiosira pseudonana
1.9e-52
208.0
323
38.7
CM15G01450
Cyanidioschyzon merolae
2.5e-52
207.6
339
37.5
gene13290
Fragilariopsis cylindrus
4.3e-52
206.8
331
37.2
Ec-02_003410
Ectocarpus siliculosus
7.4e-52
206.1
232
47.8
gsu15030
Galdieria sulphuraria
9.6e-52
205.7
326
38.3
CC00G48970
Cyclotella cryptica
1.3e-51
205.3
346
36.1
gsu130720
Galdieria sulphuraria
1.6e-51
204.9
326
38.3
Cre07.g337150
Chlamydomonas reinhardtii
2.1e-51
204.5
325
35.4
ENSG00000111445
Homo sapiens
2.1e-51
204.5
332
35.8
pte66270
Paramecium tetraurelia
2.8e-51
204.1
327
35.8
Cre12.g527300
Chlamydomonas reinhardtii
3.6e-51
203.8
318
37.1
CC00G97960
Cyclotella cryptica
4.8e-51
203.4
325
39.1
fso168430
Fistulifera solaris
4.8e-51
203.4
329
36.5
fso151940
Fistulifera solaris
6.2e-51
203.0
329
36.5
PSNMU-V1.4_AUG-EV-PASAV3_0119840
Pseudo-nitzschia multistriata
6.2e-51
203.0
299
40.5
ptri147210
Phaeodactylum tricornutum
6.2e-51
203.0
326
38.3
ps00G170170
Pseudo-nitzschia multiseries
8.1e-51
202.6
214
48.6
FBgn0032244
Drosophila melanogaster
1.1e-50
202.2
326
36.2
gene10966
Fragilariopsis cylindrus
1.4e-50
201.8
217
48.8
tps213810
Thalassiosira pseudonana
1.4e-50
201.8
331
36.3
fso139650
Fistulifera solaris
1.8e-50
201.4
333
38.7
fso195340
Fistulifera solaris
1.8e-50
201.4
333
39.0
ptri32500
Phaeodactylum tricornutum
3.1e-50
200.7
345
34.8
sya00G204900
Synedra acus
3.1e-50
200.7
337
34.4
AA0004G04040
Aureococcus anophagefferens
9.0e-50
199.1
238
46.6
sya00G13320
Synedra acus
1.2e-49
198.7
220
47.3
gsu38630
Galdieria sulphuraria
1.5e-49
198.4
331
36.6
Sro793_g203250
Seminavis robusta
1.5e-49
198.4
254
45.3
WBGene00004338
Caenorhabditis elegans
2.6e-49
197.6
339
36.9
Naga_100413g2
Nannochloropsis gaditana
2.6e-49
197.6
368
36.7
Pp3c16_21800
Physcomitrella patens
3.4e-49
197.2
340
36.2
ENSG00000049541
Homo sapiens
4.5e-49
196.8
343
35.9
SPAC27E2.10c
Schizosaccharomyces pombe
2.2e-48
194.5
339
35.7
ccr162100
Chondrus crispus
3.8e-48
193.7
325
37.5
AT1G77470
Arabidopsis thaliana
6.4e-48
193.0
344
35.8
YNL290W
Saccharomyces cerevisiae strain S288C
6.4e-48
193.0
337
34.7
Sro730_g194110
Seminavis robusta
6.4e-48
193.0
331
35.6
emh485910
Emiliania huxleyi
1.1e-47
192.2
333
36.0
Ec-02_004800
Ectocarpus siliculosus
3.2e-47
190.7
328
34.8
emh490460
Emiliania huxleyi
7.1e-47
189.5
328
34.1
FBgn0260985
Drosophila melanogaster
1.2e-46
188.7
333
35.4
emh456660
Emiliania huxleyi
1.6e-46
188.3
328
33.8
SPAC1687.03c
Schizosaccharomyces pombe
4.6e-46
186.8
327
36.4
AT1G63160
Arabidopsis thaliana
6.0e-46
186.4
328
35.7
CM06G01100
Cyanidioschyzon merolae
5.1e-45
183.3
283
38.5
pte259470
Paramecium tetraurelia
3.3e-44
180.6
333
35.7
YOL094C
Saccharomyces cerevisiae strain S288C
4.3e-44
180.3
331
35.3
ccr38980
Chondrus crispus
1.6e-43
178.3
327
34.6
tho295520
Thalassiosira oceanica
2.4e-42
174.5
340
31.8
AA0011G02360
Aureococcus anophagefferens
4.0e-42
173.7
219
42.0
Ec-06_006730
Ectocarpus siliculosus
7.1e-39
162.9
216
38.9
Ec-06_005940
Ectocarpus siliculosus
1.8e-37
158.3
335
31.9
pte639640
Paramecium tetraurelia
4.6e-30
133.7
284
29.9
Pp3c25_5630
Physcomitrella patens
8.7e-29
129.4
273
30.4
AT5G27740
Arabidopsis thaliana
1.5e-28
128.6
265
30.2
Cre16.g679950
Chlamydomonas reinhardtii
2.5e-28
127.9
272
28.7
emh514960
Emiliania huxleyi
4.1e-26
120.6
89
59.6
emh626820
Emiliania huxleyi
6.9e-26
119.8
244
33.2
emh160620
Emiliania huxleyi
6.9e-26
119.8
244
33.2
sya00G47630
Synedra acus
2.0e-25
118.2
237
31.2
YBR087W
Saccharomyces cerevisiae strain S288C
3.4e-25
117.5
349
26.9
sya00G259220
Synedra acus
3.4e-25
117.5
237
31.2
WBGene00004339
Caenorhabditis elegans
1.0e-24
115.9
231
33.3
sya00G65660
Synedra acus
2.2e-24
114.8
237
30.8
Ec-04_003360
Ectocarpus siliculosus
2.9e-24
114.4
272
25.7
ENSG00000133119
Homo sapiens
8.5e-24
112.8
243
29.6
FBgn0028700
Drosophila melanogaster
1.1e-23
112.5
237
29.5
tho47620
Thalassiosira oceanica
1.9e-23
111.7
249
30.1
Naga_100093g7
Nannochloropsis gaditana
9.4e-23
109.4
237
29.5
ccr77340
Chondrus crispus
4.6e-22
107.1
232
30.2
gsu50360
Galdieria sulphuraria
6.1e-22
106.7
230
29.6
SPBC83.14c
Schizosaccharomyces pombe
6.1e-22
106.7
231
30.7
AA0001G02560
Aureococcus anophagefferens
7.9e-22
106.3
244
30.7
ptri207520
Phaeodactylum tricornutum
1.8e-21
105.1
238
29.0
tps118600
Thalassiosira pseudonana
1.8e-21
105.1
241
29.0
Sro142_g066280
Seminavis robusta
2.3e-21
104.8
241
27.8
CC00G116610
Cyclotella cryptica
3.0e-21
104.4
247
29.1
sya00G186430
Synedra acus
7.4e-20
99.8
100
47.0
AT1G14460
Arabidopsis thaliana
4.8e-19
97.1
309
29.4
pte295110
Paramecium tetraurelia
6.3e-19
96.7
158
39.9
gene17681
Fragilariopsis cylindrus
8.2e-19
96.3
239
26.8
ps00G65170
Pseudo-nitzschia multiseries
8.2e-19
96.3
229
26.6
PSNMU-V1.4_AUG-EV-PASAV3_0086790
Pseudo-nitzschia multistriata
1.8e-18
95.1
263
27.4
CM16G00460
Cyanidioschyzon merolae
5.3e-18
93.6
256
28.5
Pp3c26_6700
Physcomitrella patens
5.3e-18
93.6
288
27.8
Pp3c4_17210
Physcomitrella patens
6.9e-18
93.2
288
27.8
AT2G02480
Arabidopsis thaliana
9.1e-18
92.8
295
27.8
fso106870
Fistulifera solaris
3.8e-16
87.4
246
26.8
fso193870
Fistulifera solaris
3.8e-16
87.4
246
26.8
Pp3c13_13940
Physcomitrella patens
3.6e-14
80.9
289
26.6
AT4G24790
Arabidopsis thaliana
4.7e-14
80.5
284
25.0
gsu106230
Galdieria sulphuraria
4.7e-14
80.5
272
29.4
Pp3c9_18380
Physcomitrella patens
4.7e-14
80.5
288
26.0
YOR217W
Saccharomyces cerevisiae strain S288C
4.7e-14
80.5
269
28.6
AT1G24290
Arabidopsis thaliana
6.1e-14
80.1
310
23.9
Ec-06_005050
Ectocarpus siliculosus
2.6e-12
74.7
262
24.8
Ec-00_006190
Ectocarpus siliculosus
4.8e-11
70.5
220
25.5
pte690410
Paramecium tetraurelia
4.8e-11
70.5
262
25.2
pte616020
Paramecium tetraurelia
1.4e-10
68.9
263
25.9
pte254120
Paramecium tetraurelia
9.1e-10
66.2
179
28.5
AT5G22010
Arabidopsis thaliana
1.6e-09
65.5
250
23.6
pte687580
Paramecium tetraurelia
2.0e-09
65.1
181
28.2
YNL218W
Saccharomyces cerevisiae strain S288C
2.2e-08
61.6
243
25.9
WBGene00004337
Caenorhabditis elegans
2.9e-08
61.2
257
24.9
AA0003G03880
Aureococcus anophagefferens
5.0e-08
60.5
210
24.3
SPAC26H5.02c
Schizosaccharomyces pombe
6.5e-08
60.1
314
24.2
Ec-08_002180
Ectocarpus siliculosus
1.1e-07
59.3
171
25.7
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (4 genes)
Thalassiosira pseudonana (4 genes)
Thalassiosira oceanica (3 genes)
Pseudo-nitzschia multiseries (4 genes)
Fistulifera solaris (8 genes)
Fragilariopsis cylindrus (5 genes)
Cyclotella cryptica (4 genes)
Aureococcus anophagefferens (4 genes)
Ectocarpus siliculosus (10 genes)
Nannochloropsis gaditana (3 genes)
Homo sapiens (4 genes)
Drosophila melanogaster (4 genes)
Caenorhabditis elegans (5 genes)
Saccharomyces cerevisiae strain S288C (6 genes)
Schizosaccharomyces pombe (5 genes)
Arabidopsis thaliana (9 genes)
Cyanidioschyzon merolae (4 genes)
Chondrus crispus (4 genes)
Galdieria sulphuraria (6 genes)
Emiliania huxleyi (7 genes)
Paramecium tetraurelia (9 genes)
Seminavis robusta (5 genes)
Synedra acus (7 genes)
Physcomitrella patens (8 genes)
Chlamydomonas reinhardtii (4 genes)
Pseudo-nitzschia multistriata (4 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing