Gene: Ec-08_003900 (Ectocarpus siliculosus)

Overview top

Gene Identifier
Ec-08_003900
Transcript Identifier
Ec-08_003900.1
Gene Type
Coding gene
Location
chr_08 : 3707853-3715553 : negative

Family Information

Homologous gene family
HOM02SEM000388
(90 genes in 26 species)
specific family
Orthologous gene family
ORTHO02SEM000793
(57 genes in 26 species)
specific family

Descriptions

Identifiers

Type Value
GeneNameEc-08_003900

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006260
IEA
InterProDNA replication
GO:0097435
IEA
PLAZA Integrative Orthologysupramolecular fiber organization FBgn0030871
GO:0046331
IEA
PLAZA Integrative Orthologylateral inhibition FBgn0030871
GO:0044271
IEA
PLAZA Integrative Orthologycellular nitrogen compound biosynthetic process ENSG00000163918
GO:0010604
IEA
PLAZA Integrative Orthologypositive regulation of macromolecule metabolic process ENSG00000163918
GO:0048869
IEA
PLAZA Integrative Orthologycellular developmental process FBgn0030871
GO:0042769
IEA
PLAZA Integrative OrthologyDNA damage response, detection of DNA damage ENSG00000163918
GO:0051347
IEA
PLAZA Integrative Orthologypositive regulation of transferase activity ENSG00000163918
GO:2000573
IEA
PLAZA Integrative Orthologypositive regulation of DNA biosynthetic process ENSG00000163918
GO:0044818
IEA
PLAZA Integrative Orthologymitotic G2/M transition checkpoint SPAC23D3.02
GO:0032502
IEA
PLAZA Integrative Orthologydevelopmental process FBgn0030871
GO:0019438
IEA
PLAZA Integrative Orthologyaromatic compound biosynthetic process ENSG00000163918
GO:0104004
IEA
PLAZA Integrative Orthologycellular response to environmental stimulus SPAC23D3.02
GO:0051338
IEA
PLAZA Integrative Orthologyregulation of transferase activity ENSG00000163918
GO:0071840
IEA
PLAZA Integrative Orthologycellular component organization or biogenesis YJR068W
GO:0016043
IEA
PLAZA Integrative Orthologycellular component organization YJR068W
GO:0009889
IEA
PLAZA Integrative Orthologyregulation of biosynthetic process ENSG00000163918
GO:0007346
IEA
PLAZA Integrative Orthologyregulation of mitotic cell cycle SPAC23D3.02
GO:0010972
IEA
PLAZA Integrative Orthologynegative regulation of G2/M transition of mitotic cell cycle SPAC23D3.02
GO:0009628
IEA
PLAZA Integrative Orthologyresponse to abiotic stimulus SPAC23D3.02
GO:0000819
IEA
PLAZA Integrative Orthologysister chromatid segregation YJR068W
GO:0045165
IEA
PLAZA Integrative Orthologycell fate commitment FBgn0030871
GO:0051716
IEA
PLAZA Integrative Orthologycellular response to stimulus SPAC23D3.02
GO:0051276
IEA
PLAZA Integrative Orthologychromosome organization YJR068W
GO:0006312
IEA
PLAZA Integrative Orthologymitotic recombination ENSG00000163918
GO:0019725
IEA
PLAZA Integrative Orthologycellular homeostasis ENSG00000163918
GO:0006310
IEA
PLAZA Integrative OrthologyDNA recombination ENSG00000163918
GO:0019985
IEA
PLAZA Integrative Orthologytranslesion synthesis ENSG00000163918
GO:0006301
IEA
PLAZA Integrative Orthologypostreplication repair ENSG00000163918
GO:0010389
IEA
PLAZA Integrative Orthologyregulation of G2/M transition of mitotic cell cycle SPAC23D3.02
GO:0043085
IEA
PLAZA Integrative Orthologypositive regulation of catalytic activity ENSG00000163918
GO:0010948
IEA
PLAZA Integrative Orthologynegative regulation of cell cycle process SPAC23D3.02
GO:0000226
IEA
PLAZA Integrative Orthologymicrotubule cytoskeleton organization FBgn0030871
GO:0009966
IEA
PLAZA Integrative Orthologyregulation of signal transduction ENSG00000163918
GO:0048523
IEA
PLAZA Integrative Orthologynegative regulation of cellular process SPAC23D3.02
GO:0045930
IEA
PLAZA Integrative Orthologynegative regulation of mitotic cell cycle SPAC23D3.02
GO:1901991
IEA
PLAZA Integrative Orthologynegative regulation of mitotic cell cycle phase transition SPAC23D3.02
GO:0045935
IEA
PLAZA Integrative Orthologypositive regulation of nucleobase-containing compound metabolic process ENSG00000163918
GO:1901990
IEA
PLAZA Integrative Orthologyregulation of mitotic cell cycle phase transition SPAC23D3.02
GO:0035556
IEA
PLAZA Integrative Orthologyintracellular signal transduction ENSG00000163918
GO:0071897
IEA
PLAZA Integrative OrthologyDNA biosynthetic process ENSG00000163918
GO:1901988
IEA
PLAZA Integrative Orthologynegative regulation of cell cycle phase transition SPAC23D3.02
GO:0048522
IEA
PLAZA Integrative Orthologypositive regulation of cellular process ENSG00000163918
GO:0048518
IEA
PLAZA Integrative Orthologypositive regulation of biological process ENSG00000163918
GO:0048519
IEA
PLAZA Integrative Orthologynegative regulation of biological process SPAC23D3.02
GO:1901987
IEA
PLAZA Integrative Orthologyregulation of cell cycle phase transition SPAC23D3.02
GO:0044839
IEA
PLAZA Integrative Orthologycell cycle G2/M phase transition SPAC23D3.02
GO:0033260
IEA
PLAZA Integrative Orthologynuclear DNA replication ENSG00000163918
GO:0007093
IEA
PLAZA Integrative Orthologymitotic cell cycle checkpoint SPAC23D3.02
GO:0010564
IEA
PLAZA Integrative Orthologyregulation of cell cycle process SPAC23D3.02
GO:0050789
IEA
PLAZA Integrative Orthologyregulation of biological process SPAC23D3.02
GO:0031122
IEA
PLAZA Integrative Orthologycytoplasmic microtubule organization FBgn0030871
GO:0030154
IEA
PLAZA Integrative Orthologycell differentiation FBgn0030871
GO:0007049
IEA
PLAZA Integrative Orthologycell cycle SPAC23D3.02
GO:0006996
IEA
PLAZA Integrative Orthologyorganelle organization YJR068W
GO:0044786
IEA
PLAZA Integrative Orthologycell cycle DNA replication ENSG00000163918
GO:0007165
IEA
PLAZA Integrative Orthologysignal transduction ENSG00000163918
GO:0033314
IEA
PLAZA Integrative Orthologymitotic DNA replication checkpoint SPAC23D3.02
GO:0050896
IEA
PLAZA Integrative Orthologyresponse to stimulus SPAC23D3.02
GO:0071478
IEA
PLAZA Integrative Orthologycellular response to radiation SPAC23D3.02
GO:0010557
IEA
PLAZA Integrative Orthologypositive regulation of macromolecule biosynthetic process ENSG00000163918
GO:0033554
IEA
PLAZA Integrative Orthologycellular response to stress SPAC23D3.02
GO:0034644
IEA
PLAZA Integrative Orthologycellular response to UV SPAC23D3.02
GO:0010556
IEA
PLAZA Integrative Orthologyregulation of macromolecule biosynthetic process ENSG00000163918
GO:0000086
IEA
PLAZA Integrative OrthologyG2/M transition of mitotic cell cycle SPAC23D3.02
GO:0048583
IEA
PLAZA Integrative Orthologyregulation of response to stimulus ENSG00000163918
GO:0044774
IEA
PLAZA Integrative Orthologymitotic DNA integrity checkpoint SPAC23D3.02
GO:1902531
IEA
PLAZA Integrative Orthologyregulation of intracellular signal transduction ENSG00000163918
GO:0044772
IEA
PLAZA Integrative Orthologymitotic cell cycle phase transition SPAC23D3.02
GO:0007154
IEA
PLAZA Integrative Orthologycell communication ENSG00000163918
GO:0033683
IEA
PLAZA Integrative Orthologynucleotide-excision repair, DNA incision ENSG00000163918
GO:0034654
IEA
PLAZA Integrative Orthologynucleobase-containing compound biosynthetic process ENSG00000163918
GO:0051054
IEA
PLAZA Integrative Orthologypositive regulation of DNA metabolic process ENSG00000163918
GO:0042592
IEA
PLAZA Integrative Orthologyhomeostatic process ENSG00000163918
GO:0044770
IEA
PLAZA Integrative Orthologycell cycle phase transition SPAC23D3.02
GO:0044093
IEA
PLAZA Integrative Orthologypositive regulation of molecular function ENSG00000163918
GO:1901796
IEA
PLAZA Integrative Orthologyregulation of signal transduction by p53 class mediator ENSG00000163918
GO:0070914
IEA
PLAZA Integrative OrthologyUV-damage excision repair SPAC23D3.02
GO:0007062
IEA
PLAZA Integrative Orthologysister chromatid cohesion YJR068W
GO:0090305
IEA
PLAZA Integrative Orthologynucleic acid phosphodiester bond hydrolysis ENSG00000163918
GO:0098813
IEA
PLAZA Integrative Orthologynuclear chromosome segregation YJR068W
GO:0051726
IEA
PLAZA Integrative Orthologyregulation of cell cycle SPAC23D3.02
GO:0071214
IEA
PLAZA Integrative Orthologycellular response to abiotic stimulus SPAC23D3.02
GO:0051606
IEA
PLAZA Integrative Orthologydetection of stimulus ENSG00000163918
GO:2000278
IEA
PLAZA Integrative Orthologyregulation of DNA biosynthetic process ENSG00000163918
GO:1902749
IEA
PLAZA Integrative Orthologyregulation of cell cycle G2/M phase transition SPAC23D3.02
GO:0051171
IEA
PLAZA Integrative Orthologyregulation of nitrogen compound metabolic process ENSG00000163918
GO:0051173
IEA
PLAZA Integrative Orthologypositive regulation of nitrogen compound metabolic process ENSG00000163918
GO:0045168
IEA
PLAZA Integrative Orthologycell-cell signaling involved in cell fate commitment FBgn0030871
GO:0051052
IEA
PLAZA Integrative Orthologyregulation of DNA metabolic process ENSG00000163918
GO:1902750
IEA
PLAZA Integrative Orthologynegative regulation of cell cycle G2/M phase transition SPAC23D3.02
GO:0007059
IEA
PLAZA Integrative Orthologychromosome segregation YJR068W
GO:1903047
IEA
PLAZA Integrative Orthologymitotic cell cycle process SPAC23D3.02
GO:0090329
IEA
PLAZA Integrative Orthologyregulation of DNA-dependent DNA replication ENSG00000163918
GO:0080090
IEA
PLAZA Integrative Orthologyregulation of primary metabolic process ENSG00000163918
GO:0031323
IEA
PLAZA Integrative Orthologyregulation of cellular metabolic process ENSG00000163918
GO:0031326
IEA
PLAZA Integrative Orthologyregulation of cellular biosynthetic process ENSG00000163918
GO:0031325
IEA
PLAZA Integrative Orthologypositive regulation of cellular metabolic process ENSG00000163918
GO:0010646
IEA
PLAZA Integrative Orthologyregulation of cell communication ENSG00000163918
GO:0031328
IEA
PLAZA Integrative Orthologypositive regulation of cellular biosynthetic process ENSG00000163918
GO:0006950
IEA
PLAZA Integrative Orthologyresponse to stress SPAC23D3.02
GO:0000722
IEA
PLAZA Integrative Orthologytelomere maintenance via recombination ENSG00000163918
GO:0006275
IEA
PLAZA Integrative Orthologyregulation of DNA replication ENSG00000163918
GO:0000723
IEA
PLAZA Integrative Orthologytelomere maintenance ENSG00000163918
GO:0006272
IEA
PLAZA Integrative Orthologyleading strand elongation YJR068W
GO:0022616
IEA
PLAZA Integrative OrthologyDNA strand elongation SPAC23D3.02
GO:0006271
IEA
PLAZA Integrative OrthologyDNA strand elongation involved in DNA replication SPAC23D3.02
GO:0031570
IEA
PLAZA Integrative OrthologyDNA integrity checkpoint SPAC23D3.02
GO:0060255
IEA
PLAZA Integrative Orthologyregulation of macromolecule metabolic process ENSG00000163918
GO:0019222
IEA
PLAZA Integrative Orthologyregulation of metabolic process ENSG00000163918
GO:0070987
IEA
PLAZA Integrative Orthologyerror-free translesion synthesis ENSG00000163918
GO:0018130
IEA
PLAZA Integrative Orthologyheterocycle biosynthetic process ENSG00000163918
GO:0000278
IEA
PLAZA Integrative Orthologymitotic cell cycle SPAC23D3.02
GO:0016070
IEA
PLAZA Integrative OrthologyRNA metabolic process YJR068W
GO:0009416
IEA
PLAZA Integrative Orthologyresponse to light stimulus SPAC23D3.02
GO:0009411
IEA
PLAZA Integrative Orthologyresponse to UV SPAC23D3.02
GO:0042276
IEA
PLAZA Integrative Orthologyerror-prone translesion synthesis ENSG00000163918
GO:0045786
IEA
PLAZA Integrative Orthologynegative regulation of cell cycle SPAC23D3.02
GO:0006261
IEA
PLAZA Integrative OrthologyDNA-dependent DNA replication SPAC23D3.02
GO:0009891
IEA
PLAZA Integrative Orthologypositive regulation of biosynthetic process ENSG00000163918
GO:0009893
IEA
PLAZA Integrative Orthologypositive regulation of metabolic process ENSG00000163918
GO:1901362
IEA
PLAZA Integrative Orthologyorganic cyclic compound biosynthetic process ENSG00000163918
GO:0019219
IEA
PLAZA Integrative Orthologyregulation of nucleobase-containing compound metabolic process ENSG00000163918
GO:0072331
IEA
PLAZA Integrative Orthologysignal transduction by p53 class mediator ENSG00000163918
GO:0023051
IEA
PLAZA Integrative Orthologyregulation of signaling ENSG00000163918
GO:0023052
IEA
PLAZA Integrative Orthologysignaling ENSG00000163918
GO:0000076
IEA
PLAZA Integrative OrthologyDNA replication checkpoint SPAC23D3.02
GO:0000075
IEA
PLAZA Integrative Orthologycell cycle checkpoint SPAC23D3.02
GO:0065009
IEA
PLAZA Integrative Orthologyregulation of molecular function ENSG00000163918
GO:0071482
IEA
PLAZA Integrative Orthologycellular response to light stimulus SPAC23D3.02
GO:0006298
IEA
PLAZA Integrative Orthologymismatch repair YJR068W
GO:0006974
IEA
PLAZA Integrative Orthologycellular response to DNA damage stimulus SPAC23D3.02
GO:0006297
IEA
PLAZA Integrative Orthologynucleotide-excision repair, DNA gap filling ENSG00000163918
GO:0007267
IEA
PLAZA Integrative Orthologycell-cell signaling FBgn0030871
GO:1900264
IEA
PLAZA Integrative Orthologypositive regulation of DNA-directed DNA polymerase activity ENSG00000163918
GO:1900262
IEA
PLAZA Integrative Orthologyregulation of DNA-directed DNA polymerase activity ENSG00000163918
GO:0065008
IEA
PLAZA Integrative Orthologyregulation of biological quality ENSG00000163918
GO:0006296
IEA
PLAZA Integrative Orthologynucleotide-excision repair, DNA incision, 5'-to lesion ENSG00000163918
GO:0065007
IEA
PLAZA Integrative Orthologybiological regulation SPAC23D3.02
GO:0032200
IEA
PLAZA Integrative Orthologytelomere organization ENSG00000163918
GO:0032201
IEA
PLAZA Integrative Orthologytelomere maintenance via semi-conservative replication ENSG00000163918
GO:2000112
IEA
PLAZA Integrative Orthologyregulation of cellular macromolecule biosynthetic process ENSG00000163918
GO:0050790
IEA
PLAZA Integrative Orthologyregulation of catalytic activity ENSG00000163918
GO:0050794
IEA
PLAZA Integrative Orthologyregulation of cellular process SPAC23D3.02
GO:0007017
IEA
PLAZA Integrative Orthologymicrotubule-based process FBgn0030871
GO:0060249
IEA
PLAZA Integrative Orthologyanatomical structure homeostasis ENSG00000163918
GO:0000731
IEA
PLAZA Integrative OrthologyDNA synthesis involved in DNA repair ENSG00000163918
GO:0006289
IEA
PLAZA Integrative Orthologynucleotide-excision repair ENSG00000163918
GO:0009314
IEA
PLAZA Integrative Orthologyresponse to radiation SPAC23D3.02
GO:0022402
IEA
PLAZA Integrative Orthologycell cycle process SPAC23D3.02
GO:0006283
IEA
PLAZA Integrative Orthologytranscription-coupled nucleotide-excision repair ENSG00000163918
GO:0006281
IEA
PLAZA Integrative OrthologyDNA repair SPAC23D3.02
GO:0007010
IEA
PLAZA Integrative Orthologycytoskeleton organization FBgn0030871

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
InterProATP binding
GO:0003677
IEA
InterProDNA binding
GO:0017111
IEA
PLAZA Integrative Orthologynucleoside-triphosphatase activity SPAC23D3.02
GO:0016817
IEA
PLAZA Integrative Orthologyhydrolase activity, acting on acid anhydrides SPAC23D3.02
GO:0016818
IEA
PLAZA Integrative Orthologyhydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides SPAC23D3.02
GO:0008094
IEA
PLAZA Integrative OrthologyDNA-dependent ATPase activity YJR068W
GO:0042623
IEA
PLAZA Integrative OrthologyATPase activity, coupled SPAC23D3.02
GO:0033170
IEA
PLAZA Integrative Orthologyprotein-DNA loading ATPase activity YJR068W
GO:0016462
IEA
PLAZA Integrative Orthologypyrophosphatase activity SPAC23D3.02
GO:0061860
IEA
PLAZA Integrative OrthologyDNA clamp unloader activity SPAC23D3.02
GO:0003824
IEA
PLAZA Integrative Orthologycatalytic activity SPAC23D3.02
GO:0016787
IEA
PLAZA Integrative Orthologyhydrolase activity SPAC23D3.02
GO:0043142
IEA
PLAZA Integrative Orthologysingle-stranded DNA-dependent ATPase activity ENSG00000163918
GO:0003682
IEA
PLAZA Integrative Orthologychromatin binding SPAC23D3.02
GO:0005515
IEA
PLAZA Integrative Orthologyprotein binding ENSG00000163918
GO:0003689
IEA
PLAZA Integrative OrthologyDNA clamp loader activity YJR068W
GO:0016887
IEA
PLAZA Integrative OrthologyATPase activity SPAC23D3.02

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:1902494
IEA
PLAZA Integrative Orthologycatalytic complex SPAC23D3.02
GO:0032991
IEA
PLAZA Integrative Orthologyprotein-containing complex SPAC23D3.02
GO:0005829
IEA
PLAZA Integrative Orthologycytosol SPAC23D3.02
GO:0015630
IEA
PLAZA Integrative Orthologymicrotubule cytoskeleton FBgn0030871
GO:0031974
IEA
PLAZA Integrative Orthologymembrane-enclosed lumen SPAC23D3.02
GO:0005694
IEA
PLAZA Integrative Orthologychromosome SPAC23D3.02
GO:0031981
IEA
PLAZA Integrative Orthologynuclear lumen SPAC23D3.02
GO:0000228
IEA
PLAZA Integrative Orthologynuclear chromosome SPAC23D3.02
GO:0044430
IEA
PLAZA Integrative Orthologycytoskeletal part FBgn0030871
GO:0070013
IEA
PLAZA Integrative Orthologyintracellular organelle lumen SPAC23D3.02
GO:0005657
IEA
PLAZA Integrative Orthologyreplication fork SPAC23D3.02
GO:0044427
IEA
PLAZA Integrative Orthologychromosomal part SPAC23D3.02
GO:0044424
IEA
PLAZA Integrative Orthologyintracellular part SPAC23D3.02
GO:0005663
IEA
PLAZA Integrative OrthologyDNA replication factor C complex YJR068W
GO:0044422
IEA
PLAZA Integrative Orthologyorganelle part SPAC23D3.02
GO:0044428
IEA
PLAZA Integrative Orthologynuclear part SPAC23D3.02
GO:1904949
IEA
PLAZA Integrative OrthologyATPase complex SPAC23D3.02
GO:0005654
IEA
PLAZA Integrative Orthologynucleoplasm ENSG00000163918
GO:0031389
IEA
PLAZA Integrative OrthologyRad17 RFC-like complex YJR068W
GO:0000790
IEA
PLAZA Integrative Orthologynuclear chromatin SPAC23D3.02
GO:0000785
IEA
PLAZA Integrative Orthologychromatin SPAC23D3.02
GO:0031391
IEA
PLAZA Integrative OrthologyElg1 RFC-like complex SPAC23D3.02
GO:0031390
IEA
PLAZA Integrative OrthologyCtf18 RFC-like complex YJR068W
GO:0005737
IEA
PLAZA Integrative Orthologycytoplasm SPAC23D3.02
GO:0005856
IEA
PLAZA Integrative Orthologycytoskeleton FBgn0030871
GO:0005622
IEA
PLAZA Integrative Orthologyintracellular SPAC23D3.02
GO:0044464
IEA
PLAZA Integrative Orthologycell part SPAC23D3.02
GO:0005730
IEA
PLAZA Integrative Orthologynucleolus AT1G21690
GO:0044454
IEA
PLAZA Integrative Orthologynuclear chromosome part SPAC23D3.02
GO:0005634
IEA
PLAZA Integrative Orthologynucleus SPAC23D3.02
GO:0044446
IEA
PLAZA Integrative Orthologyintracellular organelle part SPAC23D3.02
GO:0044444
IEA
PLAZA Integrative Orthologycytoplasmic part SPAC23D3.02
GO:0043232
IEA
PLAZA Integrative Orthologyintracellular non-membrane-bounded organelle SPAC23D3.02
GO:0043596
IEA
PLAZA Integrative Orthologynuclear replication fork SPAC23D3.02
GO:0043233
IEA
PLAZA Integrative Orthologyorganelle lumen SPAC23D3.02
GO:0043231
IEA
PLAZA Integrative Orthologyintracellular membrane-bounded organelle SPAC23D3.02
GO:0005623
IEA
PLAZA Integrative Orthologycell SPAC23D3.02
GO:0005875
IEA
PLAZA Integrative Orthologymicrotubule associated complex FBgn0030871
GO:0043227
IEA
PLAZA Integrative Orthologymembrane-bounded organelle SPAC23D3.02
GO:0043228
IEA
PLAZA Integrative Orthologynon-membrane-bounded organelle SPAC23D3.02
GO:0043226
IEA
PLAZA Integrative Orthologyorganelle SPAC23D3.02
GO:0043229
IEA
PLAZA Integrative Orthologyintracellular organelle SPAC23D3.02

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR003959ATPase, AAA-type, core
IPR013748Replication factor C, C-terminal
IPR003593AAA+ ATPase domain
IPR008921DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal

No MapMan annotations defined for this gene.
KeggID Description
K10755RFC2_4; replication factor C subunit 2/4
No chloroplast target sequence found.