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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Ec-08_003900
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Ec-08_003900
Ectocarpus siliculosus
1.4e-199
696.8
355
100.0
Pp3c3_37360
Physcomitrella patens
3.4e-97
356.7
327
54.7
ENSG00000163918
Homo sapiens
7.3e-92
339.0
335
51.9
Ec-06_005100
Ectocarpus siliculosus
3.1e-90
333.6
327
54.7
AT1G21690
Arabidopsis thaliana
2.6e-89
330.5
302
54.3
YJR068W
Saccharomyces cerevisiae strain S288C
1.7e-85
317.8
335
49.6
fso10320
Fistulifera solaris
4.7e-83
309.7
347
48.4
gene10044
Fragilariopsis cylindrus
1.1e-82
308.5
333
48.9
SPAC23D3.02
Schizosaccharomyces pombe
1.4e-82
308.1
323
47.4
PSNMU-V1.4_AUG-EV-PASAV3_0059640
Pseudo-nitzschia multistriata
2.4e-82
307.4
374
47.1
fso131870
Fistulifera solaris
8.9e-82
305.4
342
48.2
Cre06.g251800
Chlamydomonas reinhardtii
1.2e-81
305.1
321
50.8
tps141030
Thalassiosira pseudonana
1.5e-81
304.7
341
50.1
ptri219300
Phaeodactylum tricornutum
7.6e-81
302.4
353
47.3
Sro262_g102000
Seminavis robusta
9.9e-81
302.0
357
47.1
FBgn0030871
Drosophila melanogaster
1.3e-80
301.6
345
49.3
pte233530
Paramecium tetraurelia
2.9e-80
300.4
321
46.7
gsu138090
Galdieria sulphuraria
3.8e-80
300.1
326
46.6
sya00G173570
Synedra acus
4.9e-80
299.7
343
47.5
CC00G176000
Cyclotella cryptica
6.6e-77
289.3
353
46.2
ccr112700
Chondrus crispus
2.5e-76
287.3
341
48.1
Naga_100080g2
Nannochloropsis gaditana
3.6e-75
283.5
210
67.1
emh282200
Emiliania huxleyi
6.2e-75
282.7
330
47.3
tho127820
Thalassiosira oceanica
1.1e-71
271.9
365
43.6
gene20923
Fragilariopsis cylindrus
1.4e-71
271.6
314
47.5
Sro530_g161220
Seminavis robusta
2.3e-69
264.2
354
43.8
ps00G155250
Pseudo-nitzschia multiseries
3.6e-67
256.9
415
38.8
CM12G03070
Cyanidioschyzon merolae
6.9e-66
252.7
341
44.0
WBGene00004340
Caenorhabditis elegans
3.7e-59
230.3
313
41.5
WBGene00018409
Caenorhabditis elegans
9.0e-58
225.7
331
40.2
AA0004G04040
Aureococcus anophagefferens
4.9e-56
219.9
340
40.0
Cre12.g527300
Chlamydomonas reinhardtii
9.3e-55
215.7
322
39.8
FBgn0032244
Drosophila melanogaster
9.3e-55
215.7
337
39.2
PSNMU-V1.4_AUG-EV-PASAV3_0005500
Pseudo-nitzschia multistriata
1.2e-54
215.3
325
39.7
gene13290
Fragilariopsis cylindrus
2.7e-54
214.2
323
38.4
Pp3c13_4510
Physcomitrella patens
3.5e-54
213.8
324
40.1
Sro730_g194110
Seminavis robusta
3.5e-54
213.8
315
40.6
CM15G01450
Cyanidioschyzon merolae
6.0e-54
213.0
318
39.9
ps00G185310
Pseudo-nitzschia multiseries
7.9e-54
212.6
325
38.5
ENSG00000111445
Homo sapiens
1.8e-53
211.5
345
38.3
ps00G170170
Pseudo-nitzschia multiseries
6.7e-53
209.5
214
52.3
PSNMU-V1.4_AUG-EV-PASAV3_0119840
Pseudo-nitzschia multistriata
1.9e-52
208.0
299
41.1
CC00G97960
Cyclotella cryptica
3.3e-52
207.2
329
39.8
CM06G01100
Cyanidioschyzon merolae
4.3e-52
206.8
328
40.2
emh485910
Emiliania huxleyi
5.6e-52
206.5
347
38.0
SPAC1687.03c
Schizosaccharomyces pombe
5.6e-52
206.5
322
39.1
CC00G48970
Cyclotella cryptica
7.4e-52
206.1
325
41.8
Ec-02_003410
Ectocarpus siliculosus
7.4e-52
206.1
339
38.3
tps15640
Thalassiosira pseudonana
7.4e-52
206.1
323
39.9
pte66270
Paramecium tetraurelia
1.6e-51
204.9
323
35.6
ptri147210
Phaeodactylum tricornutum
1.6e-51
204.9
325
37.8
YNL290W
Saccharomyces cerevisiae strain S288C
2.1e-51
204.5
321
38.3
Sro793_g203250
Seminavis robusta
2.1e-51
204.5
325
38.5
fso139650
Fistulifera solaris
2.8e-51
204.1
281
43.1
fso195340
Fistulifera solaris
2.8e-51
204.1
281
43.1
tps213810
Thalassiosira pseudonana
4.8e-51
203.4
323
41.2
AT1G77470
Arabidopsis thaliana
6.2e-51
203.0
328
38.7
gsu38630
Galdieria sulphuraria
6.2e-51
203.0
321
37.7
ptri32500
Phaeodactylum tricornutum
6.2e-51
203.0
321
38.6
fso168430
Fistulifera solaris
8.2e-51
202.6
318
38.4
fso151940
Fistulifera solaris
1.1e-50
202.2
318
38.4
gene10966
Fragilariopsis cylindrus
2.4e-50
201.1
212
49.5
ccr162100
Chondrus crispus
3.1e-50
200.7
328
38.4
SPAC27E2.10c
Schizosaccharomyces pombe
3.1e-50
200.7
316
39.2
sya00G204900
Synedra acus
4.0e-50
200.3
315
38.1
sya00G13320
Synedra acus
1.5e-49
198.4
212
49.1
Ec-02_004800
Ectocarpus siliculosus
2.0e-49
198.0
323
39.0
gsu130720
Galdieria sulphuraria
2.6e-49
197.6
319
38.9
FBgn0260985
Drosophila melanogaster
4.5e-49
196.8
325
37.2
gsu15030
Galdieria sulphuraria
7.6e-49
196.1
319
38.6
emh456660
Emiliania huxleyi
2.2e-48
194.5
335
36.4
Pp3c16_21800
Physcomitrella patens
2.2e-48
194.5
323
37.8
emh490460
Emiliania huxleyi
2.9e-48
194.1
335
36.4
tho295520
Thalassiosira oceanica
6.5e-48
193.0
327
39.1
Cre07.g337150
Chlamydomonas reinhardtii
1.9e-47
191.4
331
35.3
Naga_100413g2
Nannochloropsis gaditana
9.3e-47
189.1
368
37.0
AT1G63160
Arabidopsis thaliana
4.6e-46
186.8
317
37.9
WBGene00004338
Caenorhabditis elegans
7.9e-46
186.0
331
36.3
YOL094C
Saccharomyces cerevisiae strain S288C
1.0e-45
185.7
315
37.8
ENSG00000049541
Homo sapiens
1.8e-45
184.9
357
35.6
ccr38980
Chondrus crispus
8.7e-45
182.6
339
36.3
AA0011G02360
Aureococcus anophagefferens
9.7e-44
179.1
322
34.8
pte259470
Paramecium tetraurelia
9.7e-44
179.1
209
45.5
Ec-06_006730
Ectocarpus siliculosus
1.3e-37
158.7
319
30.1
Ec-06_005940
Ectocarpus siliculosus
2.0e-33
144.8
318
31.4
Cre16.g679950
Chlamydomonas reinhardtii
6.7e-29
129.8
252
31.0
emh514960
Emiliania huxleyi
6.7e-29
129.8
114
58.8
Pp3c25_5630
Physcomitrella patens
1.3e-27
125.6
292
30.8
ccr77340
Chondrus crispus
6.3e-27
123.2
351
28.2
Naga_100093g7
Nannochloropsis gaditana
6.3e-27
123.2
240
33.3
emh626820
Emiliania huxleyi
1.8e-26
121.7
234
33.8
emh160620
Emiliania huxleyi
1.8e-26
121.7
234
33.8
YBR087W
Saccharomyces cerevisiae strain S288C
3.1e-26
120.9
358
27.4
AT5G27740
Arabidopsis thaliana
2.2e-24
114.8
237
28.7
tps118600
Thalassiosira pseudonana
1.4e-23
112.1
239
31.0
pte639640
Paramecium tetraurelia
3.2e-23
110.9
233
30.0
AA0001G02560
Aureococcus anophagefferens
5.5e-23
110.2
355
26.8
sya00G65660
Synedra acus
5.5e-23
110.2
252
29.4
Ec-04_003360
Ectocarpus siliculosus
7.2e-23
109.8
239
30.1
sya00G259220
Synedra acus
7.2e-23
109.8
252
29.8
ENSG00000133119
Homo sapiens
9.4e-23
109.4
229
31.4
Sro142_g066280
Seminavis robusta
9.4e-23
109.4
235
30.2
sya00G47630
Synedra acus
2.7e-22
107.8
252
29.4
ptri207520
Phaeodactylum tricornutum
3.6e-22
107.5
238
29.8
WBGene00004339
Caenorhabditis elegans
4.7e-22
107.1
233
33.9
CC00G116610
Cyclotella cryptica
8.0e-22
106.3
247
31.2
tho47620
Thalassiosira oceanica
8.0e-22
106.3
251
31.5
SPBC83.14c
Schizosaccharomyces pombe
3.0e-21
104.4
305
27.9
gsu50360
Galdieria sulphuraria
5.2e-21
103.6
237
28.7
FBgn0028700
Drosophila melanogaster
1.1e-20
102.4
290
29.0
ps00G65170
Pseudo-nitzschia multiseries
7.4e-20
99.8
301
26.6
gene17681
Fragilariopsis cylindrus
2.8e-19
97.8
301
25.6
PSNMU-V1.4_AUG-EV-PASAV3_0086790
Pseudo-nitzschia multistriata
2.8e-19
97.8
328
25.6
pte295110
Paramecium tetraurelia
2.4e-18
94.7
163
40.5
fso106870
Fistulifera solaris
7.0e-18
93.2
240
26.7
fso193870
Fistulifera solaris
3.5e-17
90.9
240
26.2
sya00G186430
Synedra acus
4.5e-17
90.5
80
51.2
CM16G00460
Cyanidioschyzon merolae
1.0e-16
89.4
254
28.3
Pp3c4_17210
Physcomitrella patens
8.5e-16
86.3
213
31.0
Pp3c26_6700
Physcomitrella patens
5.5e-15
83.6
213
31.9
AT5G45720
Arabidopsis thaliana
1.2e-14
82.4
245
28.2
Pp3c13_13940
Physcomitrella patens
1.2e-14
82.4
305
28.2
sya00G92470
Synedra acus
2.7e-14
81.3
346
24.3
AT1G14460
Arabidopsis thaliana
2.3e-13
78.2
258
26.0
Pp3c3_17520
Physcomitrella patens
2.3e-13
78.2
297
26.3
AT4G18820
Arabidopsis thaliana
5.7e-12
73.6
249
26.9
AT1G24290
Arabidopsis thaliana
2.8e-11
71.2
293
27.0
AT2G02480
Arabidopsis thaliana
3.7e-11
70.9
353
23.2
sya00G104340
Synedra acus
3.7e-11
70.9
247
26.3
AT4G24790
Arabidopsis thaliana
9.1e-10
66.2
288
22.9
Ec-06_005050
Ectocarpus siliculosus
9.1e-10
66.2
167
29.3
Ec-00_006190
Ectocarpus siliculosus
9.1e-10
66.2
171
29.2
Pp3c9_18380
Physcomitrella patens
7.7e-09
63.2
243
26.3
AA0003G03880
Aureococcus anophagefferens
2.2e-08
61.6
233
24.9
Pp3c24_11680
Physcomitrella patens
5.0e-08
60.5
232
28.4
Pp3c23_21270
Physcomitrella patens
8.5e-08
59.7
244
27.0
Ec-08_002180
Ectocarpus siliculosus
1.1e-07
59.3
176
29.5
CM18G00280
Cyanidioschyzon merolae
1.5e-07
58.9
236
26.3
sya00G61700
Synedra acus
1.5e-07
58.9
177
28.8
Pp3c22_21030
Physcomitrella patens
2.5e-07
58.2
239
23.4
YOR217W
Saccharomyces cerevisiae strain S288C
5.5e-07
57.0
234
25.2
YMR078C
Saccharomyces cerevisiae strain S288C
4.7e-06
53.9
264
23.5
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (4 genes)
Thalassiosira pseudonana (4 genes)
Thalassiosira oceanica (3 genes)
Pseudo-nitzschia multiseries (4 genes)
Fistulifera solaris (8 genes)
Fragilariopsis cylindrus (5 genes)
Cyclotella cryptica (4 genes)
Aureococcus anophagefferens (4 genes)
Ectocarpus siliculosus (10 genes)
Nannochloropsis gaditana (3 genes)
Homo sapiens (4 genes)
Drosophila melanogaster (4 genes)
Caenorhabditis elegans (4 genes)
Saccharomyces cerevisiae strain S288C (6 genes)
Schizosaccharomyces pombe (4 genes)
Arabidopsis thaliana (10 genes)
Cyanidioschyzon merolae (5 genes)
Chondrus crispus (4 genes)
Galdieria sulphuraria (5 genes)
Emiliania huxleyi (7 genes)
Paramecium tetraurelia (5 genes)
Seminavis robusta (5 genes)
Synedra acus (10 genes)
Physcomitrella patens (12 genes)
Chlamydomonas reinhardtii (4 genes)
Pseudo-nitzschia multistriata (4 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing