Visual overview tutorial
This page contains an overview of the content of the PLAZA website.
PLAZA home page
Figure 1 : PLAZA homepage overview. With the Menu, the tree with available species and the search bar highlighted
The Menu bar gives direct access to various options such as data overview and tools for data analysis
The available species overview gives direct access to the species available in PLAZA, and details the phylogenetic relationship between these species
The Search bar gives a wide range of search options (gene id's, functional annotation, …). For more information, see
here or
here
Search bar
Figure 2 : Detail of the Search bar
A user can provide a term in the Search text field
The Data type selection can be used to select the type of data that will be returned.
Selection of species will limit the results to a specific species (if available for the selected Data type)
Figure 3 : PLAZA toolbox, this is an example of the toolbox on the experiment overview (part of the workbench). The toolbox on the gene- and gene family-page offers a different set of tools optimized for analysis of gene/gene families
A toolbox can be found on gene- , gene family- & workbench experiment-pages
The toolbox contains links to tools that can be performed on the current gene/gene family/set of genes in workbench
There is a different set of tools provided on the gene-, gene family- and experiment-overview page