Gene: CBR_g39915
General Information
Structural Information
- Species Chara braunii
- Gene Identifier CBR_g39915
- Transcript Identifier GBG63909
- Gene Type Coding gene
- Location BFEA01000044 : 607724-781870 : positive
Gene Family Information
- ID HOM05D000019
- #Genes/#Species 6761/20
- Phylogenetic origin
- ID ORTHO05D002453
- #Genes/#Species 286/99
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid GBG63909
- uniprot A0A388K1K1
Descriptions
- Description hypothetical protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0015074 | IEA | GOA Database | DNA integration | |
| GO:0006508 | IEA | GOA Database | proteolysis | |
| GO:0006278 | IEA | GOA Database | RNA-dependent DNA biosynthetic process | |
| GO:0090305 | IEA | GOA Database | nucleic acid phosphodiester bond hydrolysis |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016779 | IEA | GOA Database | nucleotidyltransferase activity | |
| GO:0004190 | IEA | GOA Database | aspartic-type endopeptidase activity | |
| GO:0003676 | IEA | GOA Database | nucleic acid binding | |
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0046872 | IEA | GOA Database | metal ion binding | |
| GO:0016740 | IEA | GOA Database | transferase activity | |
| GO:0004518 | IEA | GOA Database | nuclease activity | |
| GO:0004519 | IEA | GOA Database | endonuclease activity | |
| GO:0005524 | IEA | GOA Database | ATP binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0016787 | IEA | GOA Database | hydrolase activity | |
| GO:0016874 | IEA | GOA Database | ligase activity | |
| GO:0003964 | IEA | GOA Database | RNA-directed DNA polymerase activity | |
| GO:0000166 | IEA | GOA Database | nucleotide binding |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR012337 | Ribonuclease H-like superfamily |
| IPR005481 | Biotin carboxylase-like, N-terminal domain |
| IPR041588 | Integrase zinc-binding domain |
| IPR043502 | DNA/RNA polymerase superfamily |
| IPR005479 | Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain |
| IPR041373 | Reverse transcriptase, RNase H-like domain |
| IPR005482 | Biotin carboxylase, C-terminal |
| IPR021109 | Aspartic peptidase domain superfamily |
| IPR000477 | Reverse transcriptase domain |
| IPR036397 | Ribonuclease H superfamily |
| IPR016185 | Pre-ATP-grasp domain superfamily |
| IPR043128 | Reverse transcriptase/Diguanylate cyclase domain |
| IPR011054 | Rudiment single hybrid motif |
| IPR041577 | Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain |
| Mapman id | Description |
|---|---|
| 50.6.4 | Enzyme classification.EC_6 ligases.EC_6.4 ligase forming carbon-carbon bond |