Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G2100 LG-5 - View
Aethionema arabicum Aa31LG11G9470 LG-11 + View
Acer truncatum Atru.chr5.1170 chr5 - View
Actinidia chinensis Actinidia24339 Lachesis_group24 + View
Actinidia chinensis Actinidia32227 Lachesis_group19 + View
Actinidia chinensis Actinidia24830 Lachesis_group15 + View
Arabidopsis lyrata AL6G39230 scaffold_6 - View
Arabidopsis lyrata AL6G50600 scaffold_6 + View
Avicennia marina MSTRG.18164 ScioBoG_22153_HRSCAF_22259 - View
Avicennia marina MSTRG.21624 ScioBoG_26769_HRSCAF_26899 + View
Aquilegia oxysepala Aqoxy2G02974 CHR02 - View
Aquilegia oxysepala Aqoxy5G00738 CHR05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.9JI5AA PTHR10073:SF12 - MISMATCH REPAIR ENDONUCLEASE PMS2 arahy.Tifrunner.gnm1.Arahy.02 + View
Arabidopsis thaliana AT4G02460 DNA mismatch repair protein Encodes a protein similar to PMS1 in yeast%2C a member of the family of eukaryotic MutL homologs. The protein appears to play a role in DNA mismatch repair and in the suppression of somatic homeologous recombination. POSTMEIOTIC SEGREGATION 1 (PMS1)%3B FUNCTIONS IN: mismatched DNA binding%2C ATP binding%3B INVOLVED IN: mismatch repair%2C fruit development%2C seed development%2C DNA recombination%2C pollen development%3B LOCATED IN: nucleus%3B EXPRESSED IN: 17 plant structures%3B EXPRESSED DURING: 9 growth stages%3B CONTAINS InterPro DOMAIN/s: DNA mismatch repair%2C conserved site (InterPro:IPR014762)%2C ATPase-like%2C ATP-binding domain (InterPro:IPR003594)%2C DNA mismatch repair protein%2C C-terminal (InterPro:IPR013507)%2C MutL%2C C-terminal%2C dimerisation (InterPro:IPR014790)%2C DNA mismatch repair protein%2C N-terminal (InterPro:IPR014763)%2C Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568)%2C DNA mismatch repair protein (InterPro:IPR002099)%2C Post Meiotic Segregation 2 (InterPro:IPR015434)%2C Ribosomal protein S5 domain 2-type fold%2C subgroup (InterPro:IPR014721)%3B BEST Arabidopsis thaliana protein match is: MUTL-homologue 1 (TAIR:AT4G09140.1)%3B Has 10471 Blast hits to 7086 proteins in 2377 species: Archae - 138%3B Bacteria - 7516%3B Metazoa - 568%3B Fungi - 666%3B Plants - 148%3B Viruses - 0%3B Other Eukaryotes - 1435 (source: NCBI BLink). Chr4 - View
Brassica napus A09p05420 A09 + View
Brassica rapa BraA02t07461Z A02 - View
Brassica rapa BraA09t36180Z A09 + View
Camellia sinensis var. sinensis CSS0020039 RecName: Full=Probable U6 snRNA-associated Sm-like protein LSm4; AltName: Full=Glycine-rich protein 10; Short=GRP 10 [Nicotiana tabacum] Chr13 + View
Camellia sinensis var. sinensis CSS0027670 PREDICTED: DNA mismatch repair protein PMS1 isoform X2 [Vitis vinifera] Chr11 - View
Camellia sinensis var. sinensis CSS0029265 PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4 [Vitis vinifera] Chr6 + View
Capsicum annuum CAN.G339.22 PGAv.1.6.scaffold339 - View
Cannabis sativa CANSAT25G0223 NC_044370.1 + View
Cicer arietinum L. Ca_09150_v3 Ca_LG3_v3 + View
Cicer arietinum L. Ca_10348_v3 Ca_LG4_v3 - View
Corylus avellana Haze_04909 Similar to PMS1: DNA mismatch repair protein PMS1 (Arabidopsis thaliana OX%3D3702) 2 + View
Coffea canephora Cc01_g20720 DNA mismatch repair protein, putative chr1 + View
Citrus clementina Ciclev10018899m.g scaffold_3 + View
Carpinus fangiana Cfa005938 Cfa02 - View
Cardamine hirsuta CARHR250730 MutL DNA mismatch repair protein Chr8 - View
Carya illinoinensis CiPaw.07G107000 K12623 - U6 snRNA-associated Sm-like protein LSm4 (LSM4) Chr07 + View
Carya illinoinensis CiPaw.08G096800 K12623 - U6 snRNA-associated Sm-like protein LSm4 (LSM4) Chr08 - View
Citrullus lanatus ClCG09G005970 MutL DNA mismatch repair protein CG_Chr09 - View
Cucumis melo MELO3C016013.2 DNA mismatch repair protein PMS1 chr01 - View
Corchorus olitorius COL.COLO4_23366 hypothetical protein AWUE01018187.1 - View
Carica papaya Cpa.g.sc9.220 supercontig_9 + View
Chenopodium quinoa AUR62008655 Probable U6 snRNA-associated Sm-like protein LSm4 C_Quinoa_Scaffold_1710 + View
Capsella rubella Carub.0006s2485 K12623 - U6 snRNA-associated Sm-like protein LSm4 (LSM4) scaffold_6 - View
Capsella rubella Carub.0006s3467 K10858 - DNA mismatch repair protein PMS2 (PMS2) scaffold_6 + View
Cucumis sativus L. CsaV3_7G029150 DNA mismatch repair protein PMS1 chr7 + View
Davidia involucrata Dinv19707 GWHABJS00000007 - View
Davidia involucrata Dinv33041 GWHABJS00000010 + View
Davidia involucrata Dinv40337 GWHABJS00000005 + View
Durio zibethinus Duzib138G0111 NW_019167893.1 - View
Durio zibethinus Duzib211G0610 NW_019168049.1 - View
Durio zibethinus Duzib133G1030 NW_019167938.1 - View
Erigeron canadensis ECA248G0237 Conyza_canadensis_scaffold:9 + View
Eucalyptus grandis Eucgr.K03466 Chr11 + View
Erythranthe guttata Migut.D00202 scaffold_4 + View
Erythranthe guttata Migut.D00124 scaffold_4 + View
Eutrema salsugineum Thhalv10021732m.g K12623 - U6 snRNA-associated Sm-like protein LSm4 (LSM4) scaffold_13 - View
Eutrema salsugineum Thhalv10028404m.g K10858 - DNA mismatch repair protein PMS2 (PMS2) scaffold_3 - View
Fragaria x ananassa FAN20G0797 K10858 - DNA mismatch repair protein PMS2 (PMS2) Fvb2-3 - View
Fragaria x ananassa FAN27G3300 K10858 - DNA mismatch repair protein PMS2 (PMS2) Fvb2-1 + View
Fragaria x ananassa FAN15G0019 PTHR10073//PTHR10073:SF12 - DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTL // MISMATCH REPAIR ENDONUCLEASE PMS2 Fvb2-4 + View
Fragaria x ananassa FAN24G1953 PTHR23338//PTHR23338:SF24 - SMALL NUCLEAR RIBONUCLEOPROTEIN SM // SUBFAMILY NOT NAMED Fvb2-2 - View
Fragaria vesca FvH4_2g25510 K10858 - DNA mismatch repair protein PMS2 (PMS2) Fvb2 + View
Gossypium hirsutum Gohir.D12G135200 K12623 - U6 snRNA-associated Sm-like protein LSm4 (LSM4) D12 - View
Gossypium hirsutum Gohir.D08G052400 KOG3428//KOG3448//KOG3482 - Small nuclear ribonucleoprotein SMD1 and related snRNPs // Predicted snRNP core protein // Small nuclear ribonucleoprotein (snRNP) SMF D08 - View
Gossypium hirsutum Gohir.A08G042600 K12623 - U6 snRNA-associated Sm-like protein LSm4 (LSM4) A08 - View
Gossypium hirsutum Gohir.A12G131300 K12623 - U6 snRNA-associated Sm-like protein LSm4 (LSM4) A12 - View
Glycine max Glyma.02G155200 K10858 - DNA mismatch repair protein PMS2 (PMS2) Gm02 + View
Glycine max Glyma.10G019100 K12623 - U6 snRNA-associated Sm-like protein LSm4 (LSM4) Gm10 - View
Glycine max Glyma.19G210402 K12623 - U6 snRNA-associated Sm-like protein LSm4 (LSM4) Gm19 + View
Glycine max Glyma.03G213600 K12623 - U6 snRNA-associated Sm-like protein LSm4 (LSM4) Gm03 + View
Gossypium raimondii Gorai.008G146200 Chr08 - View
Gossypium raimondii Gorai.004G052500 Chr04 - View
Lupinus albus Lalb_Chr06g0163421 K10858 - DNA mismatch repair protein PMS2 (PMS2) Lalb_Chr06 + View
Lupinus albus Lalb_Chr02g0143231 K12623 - U6 snRNA-associated Sm-like protein LSm4 (LSM4) Lalb_Chr02 + View
Lotus japonicus Lj5g0020775 K10858 - DNA mismatch repair protein PMS2 (PMS2) chr5 + View
Lotus japonicus Lj1g0003572 K12623 - U6 snRNA-associated Sm-like protein LSm4 (LSM4) chr1 + View
Lonicera japonica Lj2C1191T9 GWHAAZE00000002 + View
Lactuca sativa Lsat_1_v5_gn_8_19721 Lsat_1_v8_lg_8 - View
Lactuca sativa Lsat_1_v5_gn_5_190620 Lsat_1_v8_lg_5 - View
Magnolia biondii MBI18_g08110_MAGBIO AED:0.15 Chr18 - View
Malus domestica MD11G1305800 DNA mismatch repair protein Chr11 + View
Malus domestica MD03G1286000 Small nuclear ribonucleoprotein family protein Chr03 + View
Manihot esculenta Manes.09G170401 Chromosome09 + View
Manihot esculenta Manes.05G063400 Chromosome05 - View
Manihot esculenta Manes.01G217500 Chromosome01 + View
Medicago truncatula Medtr7g108700 u6 snRNA-associated-like-Smprotein chr7 + View
Medicago truncatula Medtr1g088710 u6 snRNA-associated-like-Smprotein chr1 - View
Nelumbo nucifera Nn3g21455 chr3 + View
Olea europaea Oeu011450.1 scaffold1435 + View
Olea europaea Oeu054129.1 chr20 + View
Olea europaea Oeu048345.1 chr1 - View
Petunia axillaris Peaxi162Scf00001ggene001 DNA mismatch repair protein, putative Peaxi162Scf00001 - View
Punica granatum PGR044G1196 NC_045134.1 + View
Prunus persica Prupe.8G259200 Pp08 + View
Papaver somniferum PSO170G1601 NC_039360.1 - View
Populus trichocarpa Potri.014G130700 K12623 - U6 snRNA-associated Sm-like protein LSm4 (LSM4) Chr14 - View
Populus trichocarpa Potri.002G205700 K12623 - U6 snRNA-associated Sm-like protein LSm4 (LSM4) Chr02 - View
Phaseolus vulgaris Phvul.001G206200 K12623 - U6 snRNA-associated Sm-like protein LSm4 (LSM4) Chr01 + View
Quercus lobata QL03p020177 3 - View
Quercus lobata QL12p027267 12 + View
Rosa chinensis RcHm_v2.0_Chr6g0293721 RcHm_v2.0_Chr6 + View
Rhododendron simsii Rhsim13G0011500 chr13 - View
Rhododendron simsii Rhsim01G0284100 chr01 + View
Salvia bowleyana SalBow3G3296 GWHASIU00000006 + View
Salix brachista Sabra02G0153600 GWHAAZH00000002 + View
Salix brachista Sabra14G0097300 GWHAAZH00000014 - View
Simmondsia chinensis Sc05g0004040 GWHAASQ00000005 - View
Sechium edule Sed0008302 LG07 - View
Solanum lycopersicum Solyc09g074990.4 DNA mismatch repair protein PMS1 (AHRD V3.3 *** A0A1U8FBY8_CAPAN) SL4.0ch09 + View
Solanum lycopersicum Solyc01g099740.4 U6 snRNA-associated Sm-like protein LSm4 (AHRD V3.3 *-* A0A328E599_9ASTE) SL4.0ch01 + View
Schrenkiella parvula Sp2g20890 K12623 - U6 snRNA-associated Sm-like protein LSm4 (LSM4) ch2-4 + View
Schrenkiella parvula Sp3g04360 K12623 - U6 snRNA-associated Sm-like protein LSm4 (LSM4) ch3-1 + View
Schrenkiella parvula Sp6g02370 K10858 - DNA mismatch repair protein PMS2 (PMS2) ch6-1 - View
Solanum pennellii Sopen01g043260 Probable U6 snRNA-associated Sm-like protein LSm4 (Glycine-rich protein 10) (GRP 10) - Nicotiana tabacum (Common tobacco), embryo defective 1644 (emb1644) | CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain , Like-Sm ribonucleoprotein (LSM)-related domain , Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type | BEST Arabidopsis thaliana protein match is: snRNP core protein SMD3 Spenn-ch01 + View
Solanum pennellii Sopen09g029810 Encodes a protein similar to PMS1 in yeast, a member of the family of eukaryotic MutL homologs. The protein appears to play a role in DNA mismatch repair and in the suppression of somatic homeologous recombination. | POSTMEIOTIC SEGREGATION 1 (PMS1) | FUNCTIONS IN: mismatched DNA binding, ATP binding | INVOLVED IN: mismatch repair, fruit development, seed development, DNA recombination, pollen development | LOCATED IN: nucleus | EXPRESSED IN: 17 plant structures | EXPRESSED DURING: 9 growth stages | CONTAINS InterPro DOMAIN/s: DNA mismatch repair, conserved site , ATPase-like, ATP-binding domain , DNA mismatch repair protein, C-terminal , MutL, C-terminal, dimerisation , DNA mismatch repair protein, N-terminal , Ribosomal protein S5 domain 2-type fold , DNA mismatch repair protein , Post Meiotic Segregation 2 , Ribosomal protein S5 domain 2-type fold, subgroup | BEST Arabidopsis thaliana protein match is: MUTL-homologue 1 Spenn-ch09 + View
Selenicereus undatus Hund05415 Scaffold_19641 + View
Trochodendron aralioides TAR362G0065 group17 - View
Trochodendron aralioides TAR365G1115 group16 + View
Theobroma cacao Thecc.01G298000 DNA mismatch repair protein Chromosome_1 + View
Tarenaya hassleriana THA.LOC104801271 DNA mismatch repair protein PMS1 NW_010969548.1 + View
Trifolium pratense TPR.G34004 Tp57577_TGAC_v2_LG1 - View
Trifolium pratense TPR.G9614 Tp57577_TGAC_v2_LG6 - View
Tripterygium wilfordii TWI14G0261 NC_052249.1 + View
Tripterygium wilfordii TWI59G0539 NC_052248.1 - View
Utricularia gibba unitig_0.g657 unitig_0 + View
Vaccinium macrocarpon vmacro02462 Similar to PMS1: DNA mismatch repair protein PMS1 (Arabidopsis thaliana OX%3D3702) chr9_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro14997 Similar to Probable U6 snRNA-associated Sm-like protein LSm4 (Nicotiana tabacum OX%3D4097) chr7_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0720G1966 CM024071.1 - View
Vitis vinifera GSVIVG01027985001 chr7 + View