Gene: CSS0027670

General Information

Structural Information

  • Species Camellia sinensis var. sinensis
  • Gene Identifier CSS0027670
  • Transcript Identifier CSS0027670.1
  • Gene Type Coding gene
  • Location Chr11 : 9500537-9508673 : negative

Gene Family Information

  • ID HOM05D002199
  • #Genes/#Species 305/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid CSS0027670.1

Descriptions

  • Description PREDICTED: DNA mismatch repair protein PMS1 isoform X2 [Vitis vinifera]
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006298
IEA
InterPromismatch repair
GO:0010154
ISO
PLAZA Integrative Orthologyfruit development AT4G02460
GO:0000956
ISO
PLAZA Homology (enrichment)nuclear-transcribed mRNA catabolic process HOM05D002199
GO:0006310
ISO
PLAZA Integrative OrthologyDNA recombination AT4G02460
GO:0009555
ISO
PLAZA Integrative Orthologypollen development AT4G02460
GO:0048316
ISO
PLAZA Integrative Orthologyseed development AT4G02460
GO:0006396
ISO
PLAZA Homology (enrichment)RNA processing HOM05D002199
GO:0000398
ISO
PLAZA Homology (enrichment)mRNA splicing, via spliceosome HOM05D002199

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
InterProATP binding
GO:0030983
IEA
InterPromismatched DNA binding
GO:0016887
IEA
InterProATP hydrolysis activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032300
IEA
InterPromismatch repair complex
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT4G02460

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup
IPR013507 DNA mismatch repair protein, S5 domain 2-like
IPR038973 DNA mismatch repair protein MutL/Mlh/Pms
IPR036890 Histidine kinase/HSP90-like ATPase superfamily
IPR042120 MutL, C-terminal domain, dimerisation subdomain
IPR020568 Ribosomal protein S5 domain 2-type fold
IPR042121 MutL, C-terminal domain, regulatory subdomain
IPR014790 MutL, C-terminal, dimerisation
IPR037198 MutL, C-terminal domain superfamily
IPR002099 DNA mismatch repair protein family, N-terminal
Mapman id Description
14.7.2.2 DNA damage response.mismatch repair (MMR).MLH1-PMS1 heterodimer.component PMS1