Gene: CiPaw.08G096800

General Information

Structural Information

  • Species Carya illinoinensis
  • Gene Identifier CiPaw.08G096800
  • Transcript Identifier CiPaw.08G096800.1
  • Gene Type Coding gene
  • Location Chr08 : 12691565-12695492 : negative

Gene Family Information

  • ID HOM05D002199
  • #Genes/#Species 305/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id CiPaw.08G096800.v1.1
  • pacid 45841590
  • locus Caril.08G098100

Descriptions

  • Description K12623 - U6 snRNA-associated Sm-like protein LSm4 (LSM4)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000398
IEA
InterPromRNA splicing, via spliceosome
GO:0000956
IEA
InterPronuclear-transcribed mRNA catabolic process
GO:0006396
IEA
InterProRNA processing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G27720

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001163 LSM domain, eukaryotic/archaea-type
IPR034101 Sm-like protein Lsm4
IPR010920 LSM domain superfamily
IPR027141 Like-Sm (LSM) domain containing protein, LSm4/SmD1/SmD3
Mapman id Description
16.2.3.4 RNA processing.pre-mRNA splicing.U6-associated LSm accessory ribonucleoprotein complex.component LSm4