Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0015768 PREDICTED: DEAD-box ATP-dependent RNA helicase 8 [Nelumbo nucifera] Chr3 + View
CSS0030623 PREDICTED: DEAD-box ATP-dependent RNA helicase 8 [Vitis vinifera] Chr12 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G27260 LG-1 + View
Aethionema arabicum Aa31LG5G360 LG-5 - View
Aethionema arabicum Aa31LG10G15320 LG-10 + View
Acer truncatum Atru.chr5.478 chr5 - View
Actinidia chinensis Actinidia33429 Lachesis_group16 + View
Actinidia chinensis Actinidia10007 Lachesis_group0 - View
Actinidia chinensis Actinidia12712 Lachesis_group23 + View
Arabidopsis lyrata AL5G43510 scaffold_5 + View
Arabidopsis lyrata AL6G52800 scaffold_6 - View
Arabidopsis lyrata AL4G45020 scaffold_4 + View
Avicennia marina MSTRG.4865 ScioBoG_102838_HRSCAF_103081 - View
Avicennia marina MSTRG.20815 ScioBoG_26180_HRSCAF_26306 + View
Amaranthus hybridus Ah.05g176530 AmaHy_arrow1_Scaffold_5 + View
Amaranthus hybridus Ah.12g057260 DEAD-box ATP-dependent RNA helicase 8 (EC 3.6.4.13) AmaHy_arrow1_Scaffold_12 - View
Aquilegia oxysepala Aqoxy7G00366 CHR07 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.L4FN8Y K12614 - ATP-dependent RNA helicase DDX6/DHH1 (DDX6, RCK, DHH1) arahy.Tifrunner.gnm1.Arahy.12 - View
Arabidopsis thaliana AT4G00660 RNAhelicase-like 8 RNAhelicase-like 8 (RH8)%3B FUNCTIONS IN: helicase activity%2C nucleic acid binding%2C ATP binding%2C ATP-dependent helicase activity%3B INVOLVED IN: viral reproduction%2C virus-host interaction%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: RNA helicase%2C DEAD-box type%2C Q motif (InterPro:IPR014014)%2C DNA/RNA helicase%2C DEAD/DEAH box type%2C N-terminal (InterPro:IPR011545)%2C RNA helicase%2C ATP-dependent%2C DEAD-box%2C conserved site (InterPro:IPR000629)%2C DEAD-like helicase%2C N-terminal (InterPro:IPR014001)%2C DNA/RNA helicase%2C C-terminal (InterPro:IPR001650)%2C Helicase%2C superfamily 1/2%2C ATP-binding domain (InterPro:IPR014021)%3B BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT2G45810.1)%3B Has 44948 Blast hits to 43709 proteins in 3097 species: Archae - 707%3B Bacteria - 21922%3B Metazoa - 6580%3B Fungi - 4983%3B Plants - 2686%3B Viruses - 56%3B Other Eukaryotes - 8014 (source: NCBI BLink). RNAhelicase-like 8 (RH8)%3B FUNCTIONS IN: helicase activity%2C nucleic acid binding%2C ATP-dependent helicase activity%2C ATP binding%3B INVOLVED IN: viral reproduction%2C virus-host interaction%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: RNA helicase%2C DEAD-box type%2C Q motif (InterPro:IPR014014)%2C DNA/RNA helicase%2C DEAD/DEAH box type%2C N-terminal (InterPro:IPR011545)%2C RNA helicase%2C ATP-dependent%2C DEAD-box%2C conserved site (InterPro:IPR000629)%2C DEAD-like helicase%2C N-terminal (InterPro:IPR014001)%2C DNA/RNA helicase%2C C-terminal (InterPro:IPR001650)%2C Helicase%2C superfamily 1/2%2C ATP-binding domain (InterPro:IPR014021)%3B BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT2G45810.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr4 + View
Arabidopsis thaliana AT3G61240 DEA(D/H)-box RNA helicase family protein DEA(D/H)-box RNA helicase family protein%3B FUNCTIONS IN: helicase activity%2C ATP-dependent helicase activity%2C ATP binding%2C nucleic acid binding%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: RNA helicase%2C DEAD-box type%2C Q motif (InterPro:IPR014014)%2C DNA/RNA helicase%2C DEAD/DEAH box type%2C N-terminal (InterPro:IPR011545)%2C RNA helicase%2C ATP-dependent%2C DEAD-box%2C conserved site (InterPro:IPR000629)%2C DEAD-like helicase%2C N-terminal (InterPro:IPR014001)%2C DNA/RNA helicase%2C C-terminal (InterPro:IPR001650)%2C Helicase%2C superfamily 1/2%2C ATP-binding domain (InterPro:IPR014021)%3B BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT2G45810.1)%3B Has 53038 Blast hits to 46572 proteins in 3157 species: Archae - 705%3B Bacteria - 22269%3B Metazoa - 8742%3B Fungi - 5746%3B Plants - 2904%3B Viruses - 84%3B Other Eukaryotes - 12588 (source: NCBI BLink). Chr3 + View
Arabidopsis thaliana AT2G45810 DEA(D/H)-box RNA helicase family protein DEA(D/H)-box RNA helicase family protein%3B FUNCTIONS IN: helicase activity%2C ATP-dependent helicase activity%2C nucleic acid binding%2C ATP binding%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: RNA helicase%2C DEAD-box type%2C Q motif (InterPro:IPR014014)%2C DNA/RNA helicase%2C DEAD/DEAH box type%2C N-terminal (InterPro:IPR011545)%2C RNA helicase%2C ATP-dependent%2C DEAD-box%2C conserved site (InterPro:IPR000629)%2C DEAD-like helicase%2C N-terminal (InterPro:IPR014001)%2C DNA/RNA helicase%2C C-terminal (InterPro:IPR001650)%2C Helicase%2C superfamily 1/2%2C ATP-binding domain (InterPro:IPR014021)%3B BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT3G61240.2)%3B Has 68232 Blast hits to 53527 proteins in 3291 species: Archae - 672%3B Bacteria - 23017%3B Metazoa - 14526%3B Fungi - 7874%3B Plants - 4320%3B Viruses - 271%3B Other Eukaryotes - 17552 (source: NCBI BLink). Chr2 + View
Amborella trichopoda ATR0680G374 AmTr_v1.0_scaffold00009 - View
Brassica carinata BcaB02g07383 ChrB02 - View
Brassica carinata BcaC02g07056 ChrC02 + View
Brassica carinata BcaC04g24156 ChrC04 - View
Brassica carinata BcaC08g45114 ChrC08 + View
Brassica napus C08p36110 C08 + View
Brassica napus C02p38050 C02 + View
Brassica napus A09p53310 A09 + View
Brassica napus C04p71860 C04 + View
Brassica napus A09p00380 A09 - View
Brassica napus C06p27320 C06 + View
Brassica napus A07p25390 A07 + View
Brassica napus A04p34060 A04 + View
Brassica oleracea BolC8t51193H C8 + View
Brassica oleracea BolC6t37901H C6 + View
Brassica oleracea BolC4t28684H C4 + View
Brassica rapa BraA04t18867Z A04 + View
Brassica rapa BraA09t40756Z A09 + View
Brassica rapa BraA07t30183Z A07 + View
Beta vulgaris EL10Ac1g00538 K12614 - ATP-dependent RNA helicase DDX6/DHH1 (DDX6, RCK, DHH1) Chr1_EL10_PGA_scaffold3 - View
Capsicum annuum CAN.G78.48 PGAv.1.6.scaffold78 - View
Cannabis sativa CANSAT56G1072 NC_044371.1 - View
Cicer arietinum L. Ca_23652_v3 Ca_LG7_v3 + View
Cicer arietinum L. Ca_07897_v3 Ca_LG3_v3 - View
Corylus avellana Haze_15469 Similar to RH8: DEAD-box ATP-dependent RNA helicase 8 (Arabidopsis thaliana OX%3D3702) 11 + View
Coffea canephora Cc08_g14400 DEAD-box ATP-dependent RNA helicase 8 chr8 - View
Coffea canephora Cc02_g37730 DEAD-box ATP-dependent RNA helicase 8 chr2 + View
Citrus clementina Ciclev10019858m.g scaffold_3 - View
Ceratophyllum demersum CDE08G0692 6 + View
Cardamine hirsuta CARHR141080 ATP dependent RNA helicase Chr4 + View
Cardamine hirsuta CARHR171540 ATP-dependent RNA helicase, putative Chr5 + View
Cardamine hirsuta CARHR248790 ATP-dependent RNA helicase, putative Chr8 + View
Carya illinoinensis CiPaw.02G028900 K12614 - ATP-dependent RNA helicase DDX6/DHH1 (DDX6, RCK, DHH1) Chr02 + View
Carya illinoinensis CiPaw.01G058100 K12614 - ATP-dependent RNA helicase DDX6/DHH1 (DDX6, RCK, DHH1) Chr01 + View
Citrullus lanatus ClCG05G001650 ATP-dependent RNA helicase, putative CG_Chr05 - View
Cucumis melo MELO3C006121.2 Dead box ATP-dependent RNA helicase chr06 - View
Corchorus olitorius COL.COLO4_12680 hypothetical protein AWUE01014939.1 + View
Carica papaya Cpa.g.sc18.230 supercontig_18 + View
Chenopodium quinoa AUR62033320 DDX6: Probable ATP-dependent RNA helicase DDX6 C_Quinoa_Scaffold_2608 - View
Chenopodium quinoa AUR62004325 RH8: DEAD-box ATP-dependent RNA helicase 8 C_Quinoa_Scaffold_4250 + View
Capsella rubella Carub.0004s2851 K12614 - ATP-dependent RNA helicase DDX6/DHH1 (DDX6, RCK, DHH1) scaffold_4 + View
Capsella rubella Carub.0006s3655 K12614 - ATP-dependent RNA helicase DDX6/DHH1 (DDX6, RCK, DHH1) scaffold_6 - View
Capsella rubella Carub.0005s2789 K12614 - ATP-dependent RNA helicase DDX6/DHH1 (DDX6, RCK, DHH1) scaffold_5 + View
Cucumis sativus L. CsaV3_3G009030 ATP-dependent RNA helicase chr3 - View
Daucus carota DCAR_015939 hypothetical protein DCARv2_Chr4 + View
Daucus carota DCAR_004647 hypothetical protein DCARv2_Chr1 - View
Daucus carota DCAR_006916 hypothetical protein DCARv2_Chr2 + View
Daucus carota DCAR_025139 hypothetical protein DCARv2_Chr7 - View
Davidia involucrata Dinv43788 GWHABJS00000016 + View
Davidia involucrata Dinv32458 GWHABJS00000020 + View
Durio zibethinus Duzib138G1814 NW_019167893.1 + View
Durio zibethinus Duzib268G0821 NW_019168270.1 - View
Durio zibethinus Duzib133G1038 NW_019167938.1 + View
Erigeron canadensis ECA236G0144 Conyza_canadensis_scaffold:3 - View
Erigeron canadensis ECA233G3405 Conyza_canadensis_scaffold:1 - View
Eucalyptus grandis Eucgr.D02270 Chr04 + View
Erythranthe guttata Migut.A00790 scaffold_1 - View
Erythranthe guttata Migut.B01716 scaffold_2 + View
Erythranthe guttata Migut.N01432 scaffold_14 + View
Eutrema salsugineum Thhalv10005922m.g K12614 - ATP-dependent RNA helicase DDX6/DHH1 (DDX6, RCK, DHH1) scaffold_19 - View
Eutrema salsugineum Thhalv10001405m.g scaffold_22 - View
Eutrema salsugineum Thhalv10028588m.g PTHR24031//PTHR24031:SF329 - RNA HELICASE // SUBFAMILY NOT NAMED scaffold_3 + View
Fragaria x ananassa FAN03G0061 K12614 - ATP-dependent RNA helicase DDX6/DHH1 (DDX6, RCK, DHH1) Fvb7-3 - View
Fragaria x ananassa FAN01G1376 K12614 - ATP-dependent RNA helicase DDX6/DHH1 (DDX6, RCK, DHH1) Fvb7-4 - View
Fragaria x ananassa FAN10G2091 K12614 - ATP-dependent RNA helicase DDX6/DHH1 (DDX6, RCK, DHH1) Fvb7-1 + View
Fragaria x ananassa FAN06G0086 K12614 - ATP-dependent RNA helicase DDX6/DHH1 (DDX6, RCK, DHH1) Fvb7-2 + View
Fragaria vesca FvH4_7g13810 K12614 - ATP-dependent RNA helicase DDX6/DHH1 (DDX6, RCK, DHH1) Fvb7 + View
Gossypium hirsutum Gohir.A11G087100 K12614 - ATP-dependent RNA helicase DDX6/DHH1 (DDX6, RCK, DHH1) A11 + View
Gossypium hirsutum Gohir.D07G148600 K12614 - ATP-dependent RNA helicase DDX6/DHH1 (DDX6, RCK, DHH1) D07 - View
Gossypium hirsutum Gohir.A07G142800 K12614 - ATP-dependent RNA helicase DDX6/DHH1 (DDX6, RCK, DHH1) A07 - View
Gossypium hirsutum Gohir.D11G091500 K12614 - ATP-dependent RNA helicase DDX6/DHH1 (DDX6, RCK, DHH1) D11 + View
Gossypium hirsutum Gohir.D08G151600 K12614 - ATP-dependent RNA helicase DDX6/DHH1 (DDX6, RCK, DHH1) D08 + View
Gossypium hirsutum Gohir.A08G130200 K12614 - ATP-dependent RNA helicase DDX6/DHH1 (DDX6, RCK, DHH1) A08 + View
Glycine max Glyma.07G072700 K12614 - ATP-dependent RNA helicase DDX6/DHH1 (DDX6, RCK, DHH1) Gm07 + View
Glycine max Glyma.03G013000 K12614 - ATP-dependent RNA helicase DDX6/DHH1 (DDX6, RCK, DHH1) Gm03 + View
Gossypium raimondii Gorai.007G097600 Chr07 + View
Gossypium raimondii Gorai.001G169800 Chr01 - View
Gossypium raimondii Gorai.004G157400 Chr04 + View
Lupinus albus Lalb_Chr10g0097151 K12614 - ATP-dependent RNA helicase DDX6/DHH1 (DDX6, RCK, DHH1) Lalb_Chr10 + View
Lupinus albus Lalb_Chr19g0126981 K12614 - ATP-dependent RNA helicase DDX6/DHH1 (DDX6, RCK, DHH1) Lalb_Chr19 + View
Lupinus albus Lalb_Chr17g0339821 K12614 - ATP-dependent RNA helicase DDX6/DHH1 (DDX6, RCK, DHH1) Lalb_Chr17 + View
Lotus japonicus Lj3g0024533 K12614 - ATP-dependent RNA helicase DDX6/DHH1 (DDX6, RCK, DHH1) chr3 + View
Lonicera japonica Lj9C581T5 GWHAAZE00000009 + View
Lonicera japonica Lj7A516G82 GWHAAZE00000007 - View
Lonicera japonica Lj8A233T59 GWHAAZE00000008 - View
Lactuca sativa Lsat_1_v5_gn_7_4980 Lsat_1_v8_lg_7 + View
Malus domestica MD07G1141100 RNAhelicase-like 8 Chr07 + View
Malus domestica MD01G1054200 RNAhelicase-like 8 Chr01 - View
Manihot esculenta Manes.01G259600 Chromosome01 - View
Manihot esculenta Manes.05G037200 Chromosome05 - View
Medicago truncatula Medtr8g031340 DEAD-box helicase family protein chr8 - View
Nelumbo nucifera Nn1g01449 chr1 + View
Nicotiana tabacum Nitab4.5_0000386g0190 RNA helicase, ATP-dependent, DEAD-box, conserved site, P-loop containing nucleoside triphosphate hydrolase, Helicase, C-terminal, Helicase, superfamily 1/2, ATP-binding domain, RNA helicase, DEAD-box type, Q motif, DNA/RNA helicase, DEAD/DEAH box type, N-terminal Nitab4.5_0000386 - View
Nicotiana tabacum Nitab4.5_0002160g0090 Helicase, C-terminal, DNA/RNA helicase, DEAD/DEAH box type, N-terminal, Helicase, superfamily 1/2, ATP-binding domain, P-loop containing nucleoside triphosphate hydrolase, RNA helicase, DEAD-box type, Q motif Nitab4.5_0002160 + View
Olea europaea Oeu053288.1 scaffold638 - View
Olea europaea Oeu056353.1 chr15 - View
Oryza sativa ssp. japonica Os02g0641800 Similar to ATP-dependent RNA helicase dhh1. Similar to RNA helicase (Fragment). chr02 + View
Oryza sativa ssp. japonica Os04g0533000 Similar to RNA helicase (Fragment). chr04 + View
Punica granatum PGR042G3386 NC_045130.1 - View
Punica granatum PGR031G2591 NC_045127.1 - View
Pisum sativum Psat4g202840 Helicase conserved C-terminal domain chr4LG4 + View
Populus trichocarpa Potri.014G081100 K12614 - ATP-dependent RNA helicase DDX6/DHH1 (DDX6, RCK, DHH1) Chr14 + View
Populus trichocarpa Potri.002G157500 K12614 - ATP-dependent RNA helicase DDX6/DHH1 (DDX6, RCK, DHH1) Chr02 + View
Quercus lobata QL08p049469 8 - View
Rosa chinensis RcHm_v2.0_Chr1g0353991 RcHm_v2.0_Chr1 + View
Rhododendron simsii Rhsim07G0017600 chr07 - View
Rhododendron simsii Rhsim01G0152000 chr01 - View
Striga asiatica SGA_v2.0_scaffold43G16440 scaffold43 - View
Striga asiatica SGA_v2.0_scaffold11G05658 scaffold11 + View
Salvia bowleyana SalBow3G3116 GWHASIU00000006 + View
Salix brachista Sabra02G0125200 GWHAAZH00000002 + View
Salix brachista Sabra14G0059000 GWHAAZH00000014 + View
Simmondsia chinensis Sc23g0003060 GWHAASQ00000023 - View
Sechium edule Sed0015135 LG12 - View
Solanum lycopersicum Solyc01g094350.4 RNA helicase DEAD4 SL4.0ch01 + View
Schrenkiella parvula Sp5g02130 K12614 - ATP-dependent RNA helicase DDX6/DHH1 (DDX6, RCK, DHH1) ch5-1 - View
Schrenkiella parvula Sp4g27880 K12614 - ATP-dependent RNA helicase DDX6/DHH1 (DDX6, RCK, DHH1) ch4-6 + View
Schrenkiella parvula Sp6g00650 PTHR24031//PTHR24031:SF329 - RNA HELICASE // SUBFAMILY NOT NAMED ch6-1 + View
Solanum pennellii Sopen05g028180 RNAhelicase-like 8 (RH8) | FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding | INVOLVED IN: viral reproduction, virus-host interaction | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif , DNA/RNA helicase, DEAD/DEAH box type, N-terminal , RNA helicase, ATP-dependent, DEAD-box, conserved site , DEAD-like helicase, N-terminal , DNA/RNA helicase, C-terminal , Helicase, superfamily 1/2, ATP-binding domain | BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein Spenn-ch05 - View
Solanum pennellii Sopen01g038140 RNAhelicase-like 8 (RH8) | FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding | INVOLVED IN: viral reproduction, virus-host interaction | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif , DNA/RNA helicase, DEAD/DEAH box type, N-terminal , RNA helicase, ATP-dependent, DEAD-box, conserved site , DEAD-like helicase, N-terminal , DNA/RNA helicase, C-terminal , Helicase, superfamily 1/2, ATP-binding domain | BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein Spenn-ch01 + View
Selenicereus undatus Hund11489 Scaffold_10417 - View
Trochodendron aralioides TAR375G0497 group15 + View
Trochodendron aralioides TAR636G2662 group1 - View
Trochodendron aralioides TAR374G0084 group12 + View
Theobroma cacao Thecc.01G362900 DEAD-box ATP-dependent RNA helicase 8 Chromosome_1 - View
Tarenaya hassleriana THA.LOC104817284 DEAD-box ATP-dependent RNA helicase 8 isoform X1 NW_010965946.1 + View
Tripterygium wilfordii TWI23G0332 NC_052239.1 + View
Tripterygium wilfordii TWI59G0472 NC_052248.1 + View
Tripterygium wilfordii TWI14G0555 NC_052249.1 - View
Utricularia gibba unitig_0.g1275 unitig_0 - View
Vaccinium macrocarpon vmacro20953 Similar to Os02g0641800: DEAD-box ATP-dependent RNA helicase 8 (Oryza sativa subsp. japonica OX%3D39947) chr10_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro13303 Similar to RH8: DEAD-box ATP-dependent RNA helicase 8 (Arabidopsis thaliana OX%3D3702) chr7_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0331G1099 CM024078.1 + View
Vitis vinifera GSVIVG01019787001 chr2 - View
Vitis vinifera GSVIVG01026866001 chr15 - View