Gene: Nitab4.5_0000386g0190

General Information

Structural Information

  • Species Nicotiana tabacum
  • Gene Identifier Nitab4.5_0000386g0190
  • Transcript Identifier Nitab4.5_0000386g0190.1
  • Gene Type Coding gene
  • Location Nitab4.5_0000386 : 518568-532778 : negative

Gene Family Information

  • ID HOM05D000250
  • #Genes/#Species 1697/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Nitab4.5_0000386g0190.1
  • SR1-identifier Nta16g18890.2

Descriptions

  • Description RNA helicase, ATP-dependent, DEAD-box, conserved site, P-loop containing nucleoside triphosphate hydrolase, Helicase, C-terminal, Helicase, superfamily 1/2, ATP-binding domain, RNA helicase, DEAD-box type, Q motif, DNA/RNA helicase, DEAD/DEAH box type, N-terminal
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016070
ISO
PLAZA Integrative OrthologyRNA metabolic process Solyc01g094350.4
GO:0016032
ISO
PLAZA Integrative Orthologyviral process AT4G00660
GO:0019048
ISO
PLAZA Integrative Orthologymodulation by virus of host process AT4G00660

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0005524
IEA
InterProATP binding
GO:0003724
ISO
PLAZA Integrative OrthologyRNA helicase activity Solyc01g094350.4
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT3G61240

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT2G45810

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR001650 Helicase, C-terminal
IPR011545 DEAD/DEAH box helicase domain
IPR014001 Helicase superfamily 1/2, ATP-binding domain
Mapman id Description
16.4.2.6 RNA processing.RNA surveillance.mRNA deadenylation-dependent decay.mRNA helicase (DHH1/DDX6)