Gene: Thhalv10028588m.g

General Information

Structural Information

  • Species Eutrema salsugineum
  • Gene Identifier Thhalv10028588m.g
  • Transcript Identifier Thhalv10028588m
  • Gene Type Coding gene
  • Location scaffold_3 : 259978-262800 : positive

Gene Family Information

  • ID HOM05D000250
  • #Genes/#Species 1697/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Thhalv10028588m.g.v1.0
  • pacid 20197840

Descriptions

  • Description PTHR24031//PTHR24031:SF329 - RNA HELICASE // SUBFAMILY NOT NAMED
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016070
ISO
PLAZA Integrative OrthologyRNA metabolic process Solyc01g094350.4
GO:0016032
ISO
PLAZA Integrative Orthologyviral process AT4G00660
GO:0019048
ISO
PLAZA Integrative Orthologymodulation by virus of host process AT4G00660

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0005524
IEA
InterProATP binding
GO:0003724
ISO
PLAZA Integrative OrthologyRNA helicase activity Solyc01g094350.4
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT4G00660

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011545 DEAD/DEAH box helicase domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR001650 Helicase, C-terminal
Mapman id Description
16.4.2.6 RNA processing.RNA surveillance.mRNA deadenylation-dependent decay.mRNA helicase (DHH1/DDX6)