Gene: Os02g0641800

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os02g0641800
  • Transcript Identifier Os02t0641800-01
  • Gene Type Coding gene
  • Location chr02 : 25767502-25773014 : positive

Gene Family Information

  • ID HOM05D000250
  • #Genes/#Species 1697/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Os02t0641800-01
  • MSU-ID LOC_Os02g42860.1
  • uniprot Q6H7S2

Descriptions

  • Description Similar to ATP-dependent RNA helicase dhh1.
  • Description Similar to RNA helicase (Fragment).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0019048
ISO
PLAZA Integrative Orthologymodulation by virus of host process AT4G00660
GO:0016032
ISO
PLAZA Integrative Orthologyviral process AT4G00660
GO:0016070
ISO
PLAZA Integrative OrthologyRNA metabolic process Solyc01g094350.4
GO:0034063
IBA
GOA Databasestress granule assembly
GO:0033962
IBA
GOA DatabaseP-body assembly
GO:0051028
IEA
GOA DatabasemRNA transport
GO:0006417
IEA
GOA Databaseregulation of translation
GO:0006397
IEA
GOA DatabasemRNA processing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0003729
IBA
GOA DatabasemRNA binding
GO:0004386
IEA
GOA Databasehelicase activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003724
IEA
GOA DatabaseRNA helicase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT2G45810
GO:0010494
IBA
GOA Databasecytoplasmic stress granule
GO:0000932
IBA
IEA
GOA DatabaseP-body
GO:0005737
IEA
GOA Databasecytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011545 DEAD/DEAH box helicase domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR001650 Helicase, C-terminal
Mapman id Description
16.4.2.6 RNA processing.RNA surveillance.mRNA deadenylation-dependent decay.mRNA helicase (DHH1/DDX6)