Gene: SGA_v2.0_scaffold43G16440

General Information

Structural Information

Species Striga asiatica
Gene Identifier SGA_v2.0_scaffold43G16440
Transcript Identifier SGA_v2.0_scaffold43T16440
Gene Type Coding gene
Location scaffold43 : 1675099-1679261 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000250
#Genes/#Species 1697/100
Phylogenetic origin

ID ORTHO05D002850
#Genes/#Species 258/95
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

Descriptions

Short descriptions
Ortholog descriptions

product Dead box ATP-dependent RNA helicase, putative

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0016070	ISO	PLAZA Integrative Orthology	RNA metabolic process	Solyc01g094350.4
GO:0016032	ISO	PLAZA Integrative Orthology	viral process	AT4G00660
GO:0019048	ISO	PLAZA Integrative Orthology	modulation by virus of host process	AT4G00660

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003676	IEA	InterPro	nucleic acid binding
GO:0005524	IEA	InterPro	ATP binding
GO:0003724	ISO	PLAZA Integrative Orthology	RNA helicase activity	Solyc01g094350.4
GO:0003729	ISO	PLAZA Integrative Orthology	mRNA binding	AT3G61240

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005829	ISO	PLAZA Integrative Orthology	cytosol	AT2G45810

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR014001	Helicase superfamily 1/2, ATP-binding domain
IPR001650	Helicase, C-terminal
IPR011545	DEAD/DEAH box helicase domain
IPR027417	P-loop containing nucleoside triphosphate hydrolase

Mapman id	Description
16.4.2.6	RNA processing.RNA surveillance.mRNA deadenylation-dependent decay.mRNA helicase (DHH1/DDX6)