Functional clusters

Information

  • Type Gene Ontology
  • Description transferase activity, transferring one-carbon groups

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopoda AmTr_v1.0_scaffold00061 3 CH_atr_142 8 31 0.00000496043
Corylus avellana 1 3 CH_cav_189 6 10 0.00001183
Quercus lobata CM012294 3 CH_qlo_859 7 24 0.000218056
Salix brachista GWHAAZH00000017 3 CH_sbr_158 7 14 0.000000951597
Trochodendron aralioides group14 3 CH_tar_436 7 30 0.000565265
Amborella trichopoda AmTr_v1.0_scaffold00061 4 CH_atr_142 8 31 0.00000496043
Corylus avellana 1 4 CH_cav_189 6 10 0.00001183
Quercus lobata CM012294 4 CH_qlo_859 7 24 0.000218056
Salix brachista GWHAAZH00000017 4 CH_sbr_158 7 14 0.000000951597
Trochodendron aralioides group14 4 CH_tar_436 7 30 0.000565265

Available child term results

Ontology identifier Description Number of clusters
GO:0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity 6
GO:0000234 phosphoethanolamine N-methyltransferase activity 18
GO:0000773 phosphatidyl-N-methylethanolamine N-methyltransferase activity 6
GO:0003838 sterol 24-C-methyltransferase activity 16
GO:0003864 3-methyl-2-oxobutanoate hydroxymethyltransferase activity 24
GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity 36
GO:0003886 DNA (cytosine-5-)-methyltransferase activity 2
GO:0004070 aspartate carbamoyltransferase activity 2
GO:0004164 diphthine synthase activity 10
GO:0004372 glycine hydroxymethyltransferase activity 2
GO:0004395 hexaprenyldihydroxybenzoate methyltransferase activity 2
GO:0004482 mRNA (guanine-N7-)-methyltransferase activity 10
GO:0004585 ornithine carbamoyltransferase activity 2
GO:0004644 phosphoribosylglycinamide formyltransferase activity 4
GO:0004671 protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity 4
GO:0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity 14
GO:0004809 tRNA (guanine-N2-)-methyltransferase activity 24
GO:0004851 uroporphyrin-III C-methyltransferase activity 2
GO:0008168 methyltransferase activity 212
GO:0008171 O-methyltransferase activity 440
GO:0008173 RNA methyltransferase activity 2
GO:0008176 tRNA (guanine-N7-)-methyltransferase activity 20
GO:0008425 2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity 8
GO:0008705 methionine synthase activity 2
GO:0008757 S-adenosylmethionine-dependent methyltransferase activity 22
GO:0010341 gibberellin carboxyl-O-methyltransferase activity 10
GO:0016206 catechol O-methyltransferase activity 32
GO:0016274 protein-arginine N-methyltransferase activity 20
GO:0016278 lysine N-methyltransferase activity 2
GO:0016423 tRNA (guanine) methyltransferase activity 2
GO:0016428 tRNA (cytosine-5-)-methyltransferase activity 4
GO:0016429 tRNA (adenine-N1-)-methyltransferase activity 12
GO:0016435 rRNA (guanine) methyltransferase activity 8
GO:0016742 hydroxymethyl-, formyl- and related transferase activity 12
GO:0016743 carboxyl- or carbamoyltransferase activity 10
GO:0017096 acetylserotonin O-methyltransferase activity 28
GO:0018024 histone-lysine N-methyltransferase activity 24
GO:0018025 calmodulin-lysine N-methyltransferase activity 10
GO:0018708 thiol S-methyltransferase activity 28
GO:0019010 farnesoic acid O-methyltransferase activity 44
GO:0030750 putrescine N-methyltransferase activity 14
GO:0030775 glucuronoxylan 4-O-methyltransferase activity 6
GO:0030785 [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity 8
GO:0030795 methyl jasmonate methylesterase activity 24
GO:0033799 myricetin 3'-O-methyltransferase activity 8
GO:0035243 protein-arginine omega-N symmetric methyltransferase activity 2
GO:0042054 histone methyltransferase activity 2
GO:0042409 caffeoyl-CoA O-methyltransferase activity 34
GO:0042800 histone methyltransferase activity (H3-K4 specific) 6
GO:0046975 histone methyltransferase activity (H3-K36 specific) 8
GO:0046976 histone methyltransferase activity (H3-K27 specific) 6
GO:0047150 betaine-homocysteine S-methyltransferase activity 2
GO:0047763 caffeate O-methyltransferase activity 18
GO:0050342 tocopherol O-methyltransferase activity 26
GO:0051741 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity 10
GO:0051749 indole acetic acid carboxyl methyltransferase activity 2
GO:0052624 2-phytyl-1,4-naphthoquinone methyltransferase activity 2
GO:0052667 phosphomethylethanolamine N-methyltransferase activity 2
GO:0052907 23S rRNA (adenine(1618)-N(6))-methyltransferase activity 2
GO:0070037 rRNA (pseudouridine) methyltransferase activity 30
GO:0070042 rRNA (uridine-N3-)-methyltransferase activity 6
GO:0071164 RNA trimethylguanosine synthase activity 6
GO:0080012 trihydroxyferuloyl spermidine O-methyltransferase activity 86
GO:0080150 S-adenosyl-L-methionine:benzoic acid carboxyl methyl transferase activity 46
GO:0106050 tRNA 2'-O-methyltransferase activity 4

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001