Functional clusters

Information

  • Type Gene Ontology
  • Description 3-methyl-2-oxobutanoate hydroxymethyltransferase activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_4 3 CH_aly_246 2 2 0.000198013
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.05 3 CH_arhy_331 3 7 0.00000094095
Amborella trichopoda AmTr_v1.0_scaffold00061 3 CH_atr_76 3 3 0.00000000946662
Cicer arietinum L. Ca_LG1_v3 3 CH_car_117 2 2 0.0000778301
Daucus carota DCARv2_Chr7 3 CH_dca_282 2 3 0.000191327
Fragaria x ananassa Fvb7-1 3 CH_fan_134 3 3 0.0000000847407
Fragaria vesca Fvb7 3 CH_fve_253 2 2 0.0000589102
Medicago truncatula chr4 3 CH_mtr_158 4 8 0.0000000000728188
Oryza sativa ssp. japonica chr01 3 CH_osa_287 2 2 0.0000528123
Rosa chinensis RcHm_v2.0_Chr1 3 CH_rch_576 2 3 0.000119593
Sapria himalayana scaffold18_10761044 3 CH_shi_200 2 2 0.000171541
Trifolium pratense Tp57577_TGAC_v2_LG5 3 CH_tpr_279 2 2 0.000227092
Arabidopsis lyrata scaffold_4 4 CH_aly_246 2 2 0.000198013
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.05 4 CH_arhy_331 3 7 0.00000094095
Amborella trichopoda AmTr_v1.0_scaffold00061 4 CH_atr_76 3 3 0.00000000946662
Cicer arietinum L. Ca_LG1_v3 4 CH_car_117 2 2 0.0000778301
Daucus carota DCARv2_Chr7 4 CH_dca_282 2 3 0.000191327
Fragaria x ananassa Fvb7-1 4 CH_fan_134 3 3 0.0000000847407
Fragaria vesca Fvb7 4 CH_fve_253 2 2 0.0000589102
Medicago truncatula chr4 4 CH_mtr_158 4 8 0.0000000000728188
Oryza sativa ssp. japonica chr01 4 CH_osa_287 2 2 0.0000528123
Rosa chinensis RcHm_v2.0_Chr1 4 CH_rch_576 2 3 0.000119593
Sapria himalayana scaffold18_10761044 4 CH_shi_200 2 2 0.000171541
Trifolium pratense Tp57577_TGAC_v2_LG5 4 CH_tpr_279 2 2 0.000227092

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001