Functional clusters
Information
- Type Gene Ontology
- Description 3-methyl-2-oxobutanoate hydroxymethyltransferase activity
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Arabidopsis lyrata | scaffold_4 | 3 | CH_aly_246 | 2 | 2 | 0.000198013 |
Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.05 | 3 | CH_arhy_331 | 3 | 7 | 0.00000094095 |
Amborella trichopoda | AmTr_v1.0_scaffold00061 | 3 | CH_atr_76 | 3 | 3 | 0.00000000946662 |
Cicer arietinum L. | Ca_LG1_v3 | 3 | CH_car_117 | 2 | 2 | 0.0000778301 |
Daucus carota | DCARv2_Chr7 | 3 | CH_dca_282 | 2 | 3 | 0.000191327 |
Fragaria x ananassa | Fvb7-1 | 3 | CH_fan_134 | 3 | 3 | 0.0000000847407 |
Fragaria vesca | Fvb7 | 3 | CH_fve_253 | 2 | 2 | 0.0000589102 |
Medicago truncatula | chr4 | 3 | CH_mtr_158 | 4 | 8 | 0.0000000000728188 |
Oryza sativa ssp. japonica | chr01 | 3 | CH_osa_287 | 2 | 2 | 0.0000528123 |
Rosa chinensis | RcHm_v2.0_Chr1 | 3 | CH_rch_576 | 2 | 3 | 0.000119593 |
Sapria himalayana | scaffold18_10761044 | 3 | CH_shi_200 | 2 | 2 | 0.000171541 |
Trifolium pratense | Tp57577_TGAC_v2_LG5 | 3 | CH_tpr_279 | 2 | 2 | 0.000227092 |
Arabidopsis lyrata | scaffold_4 | 4 | CH_aly_246 | 2 | 2 | 0.000198013 |
Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.05 | 4 | CH_arhy_331 | 3 | 7 | 0.00000094095 |
Amborella trichopoda | AmTr_v1.0_scaffold00061 | 4 | CH_atr_76 | 3 | 3 | 0.00000000946662 |
Cicer arietinum L. | Ca_LG1_v3 | 4 | CH_car_117 | 2 | 2 | 0.0000778301 |
Daucus carota | DCARv2_Chr7 | 4 | CH_dca_282 | 2 | 3 | 0.000191327 |
Fragaria x ananassa | Fvb7-1 | 4 | CH_fan_134 | 3 | 3 | 0.0000000847407 |
Fragaria vesca | Fvb7 | 4 | CH_fve_253 | 2 | 2 | 0.0000589102 |
Medicago truncatula | chr4 | 4 | CH_mtr_158 | 4 | 8 | 0.0000000000728188 |
Oryza sativa ssp. japonica | chr01 | 4 | CH_osa_287 | 2 | 2 | 0.0000528123 |
Rosa chinensis | RcHm_v2.0_Chr1 | 4 | CH_rch_576 | 2 | 3 | 0.000119593 |
Sapria himalayana | scaffold18_10761044 | 4 | CH_shi_200 | 2 | 2 | 0.000171541 |
Trifolium pratense | Tp57577_TGAC_v2_LG5 | 4 | CH_tpr_279 | 2 | 2 | 0.000227092 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |