Functional clusters
Information
- Type Gene Ontology
- Description 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr5 | 3 | CH_acertr_327 | 3 | 7 | 0.0000745352 |
| Acer truncatum | chr3 | 3 | CH_acertr_67 | 4 | 4 | 0.000000000751597 |
| Actinidia chinensis | Lachesis_group5 | 3 | CH_ach_253 | 2 | 2 | 0.000814819 |
| Cannabis sativa | NC_044375.1 | 3 | CH_cansat_58 | 5 | 23 | 0.0000000000281264 |
| Capsicum annuum | PGAv.1.6.scaffold128 | 3 | CH_can_229 | 3 | 16 | 0.00000572973 |
| Ceratophyllum demersum | 8 | 3 | CH_cde_204 | 2 | 2 | 0.000789796 |
| Carpinus fangiana | Cfa04 | 3 | CH_cfa_329 | 2 | 2 | 0.000757346 |
| Eucalyptus grandis | Chr11 | 3 | CH_egr_127 | 6 | 7 | 9.0874e-18 |
| Nicotiana tabacum | Nitab4.5_0000428 | 3 | CH_nta_73 | 3 | 12 | 0.0000396854 |
| Oryza sativa ssp. japonica | chr12 | 3 | CH_osa_329 | 2 | 4 | 0.000158433 |
| Striga asiatica | scaffold41 | 3 | CH_sas_101 | 2 | 3 | 0.000562805 |
| Salix brachista | GWHAAZH00000019 | 3 | CH_sbr_130 | 3 | 3 | 0.000000119127 |
| Simmondsia chinensis | GWHAASQ00000021 | 3 | CH_sci_55 | 3 | 3 | 0.000000108744 |
| Sechium edule | LG02 | 3 | CH_sed_266 | 2 | 2 | 0.000713419 |
| Sechium edule | LG12 | 3 | CH_sed_267 | 2 | 2 | 0.000713419 |
| Sequoiadendron giganteum | chr2 | 3 | CH_sgi_544 | 3 | 3 | 0.0000000355983 |
| Tripterygium wilfordii | NC_052253.1 | 3 | CH_twi_304 | 2 | 2 | 0.00055788 |
| Tripterygium wilfordii | NC_052238.1 | 3 | CH_twi_305 | 2 | 2 | 0.00055788 |
| Acer truncatum | chr5 | 4 | CH_acertr_327 | 3 | 7 | 0.0000745352 |
| Acer truncatum | chr3 | 4 | CH_acertr_67 | 4 | 4 | 0.000000000751597 |
| Actinidia chinensis | Lachesis_group5 | 4 | CH_ach_253 | 2 | 2 | 0.000814819 |
| Cannabis sativa | NC_044375.1 | 4 | CH_cansat_58 | 5 | 23 | 0.0000000000281264 |
| Capsicum annuum | PGAv.1.6.scaffold128 | 4 | CH_can_229 | 3 | 16 | 0.00000572973 |
| Ceratophyllum demersum | 8 | 4 | CH_cde_204 | 2 | 2 | 0.000789796 |
| Carpinus fangiana | Cfa04 | 4 | CH_cfa_329 | 2 | 2 | 0.000757346 |
| Eucalyptus grandis | Chr11 | 4 | CH_egr_127 | 6 | 7 | 9.0874e-18 |
| Nicotiana tabacum | Nitab4.5_0000428 | 4 | CH_nta_73 | 3 | 12 | 0.0000396854 |
| Oryza sativa ssp. japonica | chr12 | 4 | CH_osa_329 | 2 | 4 | 0.000158433 |
| Striga asiatica | scaffold41 | 4 | CH_sas_101 | 2 | 3 | 0.000562805 |
| Salix brachista | GWHAAZH00000019 | 4 | CH_sbr_130 | 3 | 3 | 0.000000119127 |
| Simmondsia chinensis | GWHAASQ00000021 | 4 | CH_sci_55 | 3 | 3 | 0.000000108744 |
| Sechium edule | LG02 | 4 | CH_sed_266 | 2 | 2 | 0.000713419 |
| Sechium edule | LG12 | 4 | CH_sed_267 | 2 | 2 | 0.000713419 |
| Sequoiadendron giganteum | chr2 | 4 | CH_sgi_544 | 3 | 3 | 0.0000000355983 |
| Tripterygium wilfordii | NC_052253.1 | 4 | CH_twi_304 | 2 | 2 | 0.00055788 |
| Tripterygium wilfordii | NC_052238.1 | 4 | CH_twi_305 | 2 | 2 | 0.00055788 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |