Functional clusters

Information

  • Type Gene Ontology
  • Description trihydroxyferuloyl spermidine O-methyltransferase activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-7 3 CH_aar_191 2 3 0.000273685
Acer truncatum chr7 3 CH_acertr_45 4 6 0.0000000000157667
Avicennia marina ScioBoG_102831_HRSCAF_103044 3 CH_ama_55 2 2 0.0000862218
Aquilegia oxysepala CHR06 3 CH_aox_177 2 2 0.0000801989
Brassica carinata ChrC03 3 CH_bca_268 3 6 0.000000274145
Brassica napus C02 3 CH_bna_182 3 6 0.000000103354
Brassica napus A02 3 CH_bna_621 2 3 0.000556834
Brassica oleracea C2 3 CH_bol_318 2 3 0.000294167
Brassica rapa A02 3 CH_bra_163 2 2 0.0000429314
Cannabis sativa NC_044373.1 3 CH_cansat_103 3 5 0.0000000646747
Capsicum annuum PGAv.1.6.scaffold354 3 CH_can_98 4 8 0.000000000591861
Citrus clementina scaffold_1 3 CH_ccl_151 3 3 0.0000000403763
Chenopodium quinoa C_Quinoa_Scaffold_1214 3 CH_cqu_145 3 3 0.000000117869
Chenopodium quinoa C_Quinoa_Scaffold_4119 3 CH_cqu_557 2 2 0.000995025
Daucus carota DCARv2_Chr9 3 CH_dca_292 2 2 0.000191333
Erigeron canadensis Conyza_canadensis_scaffold:5 3 CH_eca_113 3 3 0.0000000604069
Eucalyptus grandis Chr08 3 CH_egr_458 3 5 0.000000205513
Erythranthe guttata scaffold_5 3 CH_egut_167 4 14 0.000000242975
Erythranthe guttata scaffold_11 3 CH_egut_206 3 4 0.00000381669
Fragaria vesca Fvb4 3 CH_fve_289 2 2 0.00017673
Gossypium hirsutum D04 3 CH_ghi_113 4 6 0.0000000000128499
Gossypium hirsutum A04 3 CH_ghi_568 2 2 0.000400523
Glycine max Gm08 3 CH_gma_325 2 2 0.000113867
Helianthus annuus HanXRQChr09 3 CH_han_93 6 32 0.0000000000016067
Lonicera japonica GWHAAZE00000004 3 CH_lonja_205 3 4 0.000000021519
Magnolia biondii Chr07 3 CH_mbi_124 4 10 0.00000000108218
Malus domestica Chr16 3 CH_mdo_292 3 12 0.00000189765
Nelumbo nucifera chr2 3 CH_nnu_222 2 2 0.000144505
Olea europaea chr1 3 CH_oeu_162 2 2 0.0000533789
Prunus persica Pp02 3 CH_ppe_377 2 2 0.000223789
Quercus lobata 3 3 CH_qlo_938 2 3 0.00046464
Rosa chinensis RcHm_v2.0_Chr4 3 CH_rch_242 3 3 0.0000000238391
Rhododendron simsii chr12 3 CH_rsi_168 3 4 0.0000000249853
Salvia bowleyana GWHASIU00000007 3 CH_sbo_362 2 3 0.000136491
Salix brachista GWHAAZH00000010 3 CH_sbr_91 3 3 0.00000000595633
Sechium edule LG06 3 CH_sed_203 2 2 0.000214026
Sequoiadendron giganteum chr10 3 CH_sgi_1325 2 2 0.000730727
Sequoiadendron giganteum chr10 3 CH_sgi_483 4 14 0.00000000520469
Schrenkiella parvula ch5-6 3 CH_spa_113 2 2 0.000078734
Selenicereus undatus Scaffold_3410 3 CH_sun_51 3 7 0.00000110857
Trochodendron aralioides group1 3 CH_tar_335 2 2 0.00018011
Vanilla planifolia CM028160.1 3 CH_vpl_12 7 23 1.12973e-16
Vitis vinifera chr1 3 CH_vvi_127 3 4 0.0000000347135
Aethionema arabicum LG-7 4 CH_aar_191 2 3 0.000273685
Acer truncatum chr7 4 CH_acertr_45 4 6 0.0000000000157667
Avicennia marina ScioBoG_102831_HRSCAF_103044 4 CH_ama_55 2 2 0.0000862218
Aquilegia oxysepala CHR06 4 CH_aox_177 2 2 0.0000801989
Brassica carinata ChrC03 4 CH_bca_268 3 6 0.000000274145
Brassica napus C02 4 CH_bna_182 3 6 0.000000103354
Brassica napus A02 4 CH_bna_621 2 3 0.000556834
Brassica oleracea C2 4 CH_bol_318 2 3 0.000294167
Brassica rapa A02 4 CH_bra_163 2 2 0.0000429314
Cannabis sativa NC_044373.1 4 CH_cansat_103 3 5 0.0000000646747
Capsicum annuum PGAv.1.6.scaffold354 4 CH_can_98 4 8 0.000000000591861
Citrus clementina scaffold_1 4 CH_ccl_151 3 3 0.0000000403763
Chenopodium quinoa C_Quinoa_Scaffold_1214 4 CH_cqu_145 3 3 0.000000117869
Chenopodium quinoa C_Quinoa_Scaffold_4119 4 CH_cqu_557 2 2 0.000995025
Daucus carota DCARv2_Chr9 4 CH_dca_292 2 2 0.000191333
Erigeron canadensis Conyza_canadensis_scaffold:5 4 CH_eca_113 3 3 0.0000000604069
Eucalyptus grandis Chr08 4 CH_egr_458 3 5 0.000000205513
Erythranthe guttata scaffold_5 4 CH_egut_167 4 14 0.000000242975
Erythranthe guttata scaffold_11 4 CH_egut_206 3 4 0.00000381669
Fragaria vesca Fvb4 4 CH_fve_289 2 2 0.00017673
Gossypium hirsutum D04 4 CH_ghi_113 4 6 0.0000000000128499
Gossypium hirsutum A04 4 CH_ghi_568 2 2 0.000400523
Glycine max Gm08 4 CH_gma_325 2 2 0.000113867
Helianthus annuus HanXRQChr09 4 CH_han_93 6 32 0.0000000000016067
Lonicera japonica GWHAAZE00000004 4 CH_lonja_205 3 4 0.000000021519
Magnolia biondii Chr07 4 CH_mbi_124 4 10 0.00000000108218
Malus domestica Chr16 4 CH_mdo_292 3 12 0.00000189765
Nelumbo nucifera chr2 4 CH_nnu_222 2 2 0.000144505
Olea europaea chr1 4 CH_oeu_162 2 2 0.0000533789
Prunus persica Pp02 4 CH_ppe_377 2 2 0.000223789
Quercus lobata 3 4 CH_qlo_938 2 3 0.00046464
Rosa chinensis RcHm_v2.0_Chr4 4 CH_rch_242 3 3 0.0000000238391
Rhododendron simsii chr12 4 CH_rsi_168 3 4 0.0000000249853
Salvia bowleyana GWHASIU00000007 4 CH_sbo_362 2 3 0.000136491
Salix brachista GWHAAZH00000010 4 CH_sbr_91 3 3 0.00000000595633
Sechium edule LG06 4 CH_sed_203 2 2 0.000214026
Sequoiadendron giganteum chr10 4 CH_sgi_1325 2 2 0.000730727
Sequoiadendron giganteum chr10 4 CH_sgi_483 4 14 0.00000000520469
Schrenkiella parvula ch5-6 4 CH_spa_113 2 2 0.000078734
Selenicereus undatus Scaffold_3410 4 CH_sun_51 3 7 0.00000110857
Trochodendron aralioides group1 4 CH_tar_335 2 2 0.00018011
Vanilla planifolia CM028160.1 4 CH_vpl_12 7 23 1.12973e-16
Vitis vinifera chr1 4 CH_vvi_127 3 4 0.0000000347135

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001