Functional clusters
Information
- Type Gene Ontology
- Description caffeoyl-CoA O-methyltransferase activity
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Amborella trichopoda | AmTr_v1.0_scaffold00036 | 3 | CH_atr_53 | 4 | 7 | 0.000000000263177 |
Brassica oleracea | C1 | 3 | CH_bol_395 | 2 | 2 | 0.000915212 |
Corylus avellana | 8 | 3 | CH_cav_157 | 3 | 5 | 0.00000308523 |
Carya illinoinensis | Chr04 | 3 | CH_cil_75 | 5 | 6 | 0.0000000000000836934 |
Corchorus olitorius | AWUE01016436.1 | 3 | CH_col_109 | 2 | 2 | 0.000876296 |
Chenopodium quinoa | C_Quinoa_Scaffold_4446 | 3 | CH_cqu_275 | 3 | 5 | 0.000012253 |
Erigeron canadensis | Conyza_canadensis_scaffold:6 | 3 | CH_eca_47 | 4 | 4 | 0.0000000000894535 |
Eucalyptus grandis | Chr03 | 3 | CH_egr_520 | 3 | 4 | 0.00000115083 |
Lotus japonicus | chr2 | 3 | CH_lja_204 | 3 | 10 | 0.0000514832 |
Lactuca sativa | Lsat_1_v8_lg_2 | 3 | CH_lsa_41 | 7 | 17 | 4.84089e-17 |
Papaver somniferum | NC_039359.1 | 3 | CH_pso_274 | 4 | 20 | 0.000000301939 |
Papaver somniferum | NC_039359.1 | 3 | CH_pso_66 | 6 | 18 | 0.0000000000000193915 |
Rhododendron simsii | chr05 | 3 | CH_rsi_240 | 3 | 4 | 0.0000008744 |
Salvia bowleyana | GWHASIU00000001 | 3 | CH_sbo_295 | 4 | 74 | 0.0000226075 |
Simmondsia chinensis | GWHAASQ00000008 | 3 | CH_sci_66 | 3 | 3 | 0.000000217487 |
Solanum lycopersicum | SL4.0ch02 | 3 | CH_sly_131 | 4 | 4 | 0.00000000537193 |
Solanum lycopersicum | SL4.0ch05 | 3 | CH_sly_31 | 10 | 49 | 5.43413e-19 |
Amborella trichopoda | AmTr_v1.0_scaffold00036 | 4 | CH_atr_53 | 4 | 7 | 0.000000000263177 |
Brassica oleracea | C1 | 4 | CH_bol_395 | 2 | 2 | 0.000915212 |
Corylus avellana | 8 | 4 | CH_cav_157 | 3 | 5 | 0.00000308523 |
Carya illinoinensis | Chr04 | 4 | CH_cil_75 | 5 | 6 | 0.0000000000000836934 |
Corchorus olitorius | AWUE01016436.1 | 4 | CH_col_109 | 2 | 2 | 0.000876296 |
Chenopodium quinoa | C_Quinoa_Scaffold_4446 | 4 | CH_cqu_275 | 3 | 5 | 0.000012253 |
Erigeron canadensis | Conyza_canadensis_scaffold:6 | 4 | CH_eca_47 | 4 | 4 | 0.0000000000894535 |
Eucalyptus grandis | Chr03 | 4 | CH_egr_520 | 3 | 4 | 0.00000115083 |
Lotus japonicus | chr2 | 4 | CH_lja_204 | 3 | 10 | 0.0000514832 |
Lactuca sativa | Lsat_1_v8_lg_2 | 4 | CH_lsa_41 | 7 | 17 | 4.84089e-17 |
Papaver somniferum | NC_039359.1 | 4 | CH_pso_274 | 4 | 20 | 0.000000301939 |
Papaver somniferum | NC_039359.1 | 4 | CH_pso_66 | 6 | 18 | 0.0000000000000193915 |
Rhododendron simsii | chr05 | 4 | CH_rsi_240 | 3 | 4 | 0.0000008744 |
Salvia bowleyana | GWHASIU00000001 | 4 | CH_sbo_295 | 4 | 74 | 0.0000226075 |
Simmondsia chinensis | GWHAASQ00000008 | 4 | CH_sci_66 | 3 | 3 | 0.000000217487 |
Solanum lycopersicum | SL4.0ch02 | 4 | CH_sly_131 | 4 | 4 | 0.00000000537193 |
Solanum lycopersicum | SL4.0ch05 | 4 | CH_sly_31 | 10 | 49 | 5.43413e-19 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |