Functional clusters
Information
- Type Gene Ontology
- Description caffeoyl-CoA O-methyltransferase activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Amborella trichopoda | AmTr_v1.0_scaffold00036 | 3 | CH_atr_53 | 4 | 7 | 0.000000000263177 |
| Brassica oleracea | C1 | 3 | CH_bol_395 | 2 | 2 | 0.000915212 |
| Corylus avellana | 8 | 3 | CH_cav_157 | 3 | 5 | 0.00000308523 |
| Carya illinoinensis | Chr04 | 3 | CH_cil_75 | 5 | 6 | 0.0000000000000836934 |
| Corchorus olitorius | AWUE01016436.1 | 3 | CH_col_109 | 2 | 2 | 0.000876296 |
| Chenopodium quinoa | C_Quinoa_Scaffold_4446 | 3 | CH_cqu_275 | 3 | 5 | 0.000012253 |
| Erigeron canadensis | Conyza_canadensis_scaffold:6 | 3 | CH_eca_47 | 4 | 4 | 0.0000000000894535 |
| Eucalyptus grandis | Chr03 | 3 | CH_egr_520 | 3 | 4 | 0.00000115083 |
| Lotus japonicus | chr2 | 3 | CH_lja_204 | 3 | 10 | 0.0000514832 |
| Lactuca sativa | Lsat_1_v8_lg_2 | 3 | CH_lsa_41 | 7 | 17 | 4.84089e-17 |
| Papaver somniferum | NC_039359.1 | 3 | CH_pso_274 | 4 | 20 | 0.000000301939 |
| Papaver somniferum | NC_039359.1 | 3 | CH_pso_66 | 6 | 18 | 0.0000000000000193915 |
| Rhododendron simsii | chr05 | 3 | CH_rsi_240 | 3 | 4 | 0.0000008744 |
| Salvia bowleyana | GWHASIU00000001 | 3 | CH_sbo_295 | 4 | 74 | 0.0000226075 |
| Simmondsia chinensis | GWHAASQ00000008 | 3 | CH_sci_66 | 3 | 3 | 0.000000217487 |
| Solanum lycopersicum | SL4.0ch02 | 3 | CH_sly_131 | 4 | 4 | 0.00000000537193 |
| Solanum lycopersicum | SL4.0ch05 | 3 | CH_sly_31 | 10 | 49 | 5.43413e-19 |
| Amborella trichopoda | AmTr_v1.0_scaffold00036 | 4 | CH_atr_53 | 4 | 7 | 0.000000000263177 |
| Brassica oleracea | C1 | 4 | CH_bol_395 | 2 | 2 | 0.000915212 |
| Corylus avellana | 8 | 4 | CH_cav_157 | 3 | 5 | 0.00000308523 |
| Carya illinoinensis | Chr04 | 4 | CH_cil_75 | 5 | 6 | 0.0000000000000836934 |
| Corchorus olitorius | AWUE01016436.1 | 4 | CH_col_109 | 2 | 2 | 0.000876296 |
| Chenopodium quinoa | C_Quinoa_Scaffold_4446 | 4 | CH_cqu_275 | 3 | 5 | 0.000012253 |
| Erigeron canadensis | Conyza_canadensis_scaffold:6 | 4 | CH_eca_47 | 4 | 4 | 0.0000000000894535 |
| Eucalyptus grandis | Chr03 | 4 | CH_egr_520 | 3 | 4 | 0.00000115083 |
| Lotus japonicus | chr2 | 4 | CH_lja_204 | 3 | 10 | 0.0000514832 |
| Lactuca sativa | Lsat_1_v8_lg_2 | 4 | CH_lsa_41 | 7 | 17 | 4.84089e-17 |
| Papaver somniferum | NC_039359.1 | 4 | CH_pso_274 | 4 | 20 | 0.000000301939 |
| Papaver somniferum | NC_039359.1 | 4 | CH_pso_66 | 6 | 18 | 0.0000000000000193915 |
| Rhododendron simsii | chr05 | 4 | CH_rsi_240 | 3 | 4 | 0.0000008744 |
| Salvia bowleyana | GWHASIU00000001 | 4 | CH_sbo_295 | 4 | 74 | 0.0000226075 |
| Simmondsia chinensis | GWHAASQ00000008 | 4 | CH_sci_66 | 3 | 3 | 0.000000217487 |
| Solanum lycopersicum | SL4.0ch02 | 4 | CH_sly_131 | 4 | 4 | 0.00000000537193 |
| Solanum lycopersicum | SL4.0ch05 | 4 | CH_sly_31 | 10 | 49 | 5.43413e-19 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |