Functional clusters

Information

  • Type Gene Ontology
  • Description hydroxymethyl-, formyl- and related transferase activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Anthoceros agrestis Sc2ySwM_369 3 CH_aag_96 3 6 0.0000424737
Chara braunii BFEA01000488 3 CH_cbr_77 3 5 0.0000127984
Ceratophyllum demersum 2 3 CH_cde_122 4 27 0.000187125
Rhododendron simsii chr04 3 CH_rsi_116 7 39 0.0000000000762332
Rhododendron simsii chr08 3 CH_rsi_493 4 34 0.000643982
Sequoiadendron giganteum chr4 3 CH_sgi_751 3 3 0.00000199351
Anthoceros agrestis Sc2ySwM_369 4 CH_aag_96 3 6 0.0000424737
Chara braunii BFEA01000488 4 CH_cbr_77 3 5 0.0000127984
Ceratophyllum demersum 2 4 CH_cde_122 4 27 0.000187125
Rhododendron simsii chr04 4 CH_rsi_116 7 39 0.0000000000762332
Rhododendron simsii chr08 4 CH_rsi_493 4 34 0.000643982
Sequoiadendron giganteum chr4 4 CH_sgi_751 3 3 0.00000199351

Available child term results

Ontology identifier Description Number of clusters
GO:0003864 3-methyl-2-oxobutanoate hydroxymethyltransferase activity 24
GO:0004372 glycine hydroxymethyltransferase activity 2
GO:0004644 phosphoribosylglycinamide formyltransferase activity 4

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001