Functional clusters

Information

  • Type Gene Ontology
  • Description response to inorganic substance

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Erigeron canadensis Conyza_canadensis_scaffold:8 3 CH_eca_239 6 8 0.0000357334
Erigeron canadensis Conyza_canadensis_scaffold:9 3 CH_eca_281 5 5 0.000075063
Selaginella moellendorffii scaffold_7 3 CH_smo_167 12 50 0.000550641
Erigeron canadensis Conyza_canadensis_scaffold:8 4 CH_eca_239 6 8 0.0000357334
Erigeron canadensis Conyza_canadensis_scaffold:9 4 CH_eca_281 5 5 0.000075063
Selaginella moellendorffii scaffold_7 4 CH_smo_167 12 50 0.000550641

Available child term results

Ontology identifier Description Number of clusters
GO:0000303 response to superoxide 16
GO:0000304 response to singlet oxygen 18
GO:0005513 detection of calcium ion 6
GO:0009269 response to desiccation 26
GO:0009270 response to humidity 2
GO:0009413 response to flooding 2
GO:0009414 response to water deprivation 8
GO:0009415 response to water 10
GO:0009819 drought recovery 18
GO:0010038 response to metal ion 8
GO:0010039 response to iron ion 10
GO:0010042 response to manganese ion 8
GO:0010043 response to zinc ion 4
GO:0010044 response to aluminum ion 16
GO:0010045 response to nickel cation 20
GO:0010167 response to nitrate 10
GO:0010193 response to ozone 2
GO:0010226 response to lithium ion 32
GO:0010273 detoxification of copper ion 6
GO:0010299 detoxification of cobalt ion 4
GO:0010421 hydrogen peroxide-mediated programmed cell death 26
GO:0019430 removal of superoxide radicals 2
GO:0032025 response to cobalt ion 6
GO:0035865 cellular response to potassium ion 2
GO:0042542 response to hydrogen peroxide 6
GO:0042631 cellular response to water deprivation 14
GO:0046686 response to cadmium ion 20
GO:0046688 response to copper ion 30
GO:0051592 response to calcium ion 2
GO:0071242 cellular response to ammonium ion 4
GO:0071249 cellular response to nitrate 10
GO:0071275 cellular response to aluminum ion 2
GO:0071277 cellular response to calcium ion 10
GO:0071280 cellular response to copper ion 8
GO:0071284 cellular response to lead ion 8
GO:0071287 cellular response to manganese ion 26
GO:0071289 cellular response to nickel ion 20
GO:0071291 cellular response to selenium ion 8
GO:0071294 cellular response to zinc ion 8
GO:0071452 cellular response to singlet oxygen 2
GO:0071457 cellular response to ozone 2
GO:0071585 detoxification of cadmium ion 2
GO:0071731 response to nitric oxide 6
GO:0080033 response to nitrite 2
GO:0090547 response to low humidity 2
GO:1902584 positive regulation of response to water deprivation 2
GO:1903842 response to arsenite ion 2
GO:1904383 response to sodium phosphate 78
GO:1990532 stress response to nickel ion 4

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001