Functional clusters

Information

  • Type Gene Ontology
  • Description cellular response to nickel ion

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Avicennia marina ScioBoG_102841_HRSCAF_103114 3 CH_ama_82 2 2 0.000258665
Eucalyptus grandis Chr01 3 CH_egr_378 3 3 0.00000000513834
Medicago truncatula chr1 3 CH_mtr_496 2 2 0.0000410863
Nicotiana tabacum Nitab4.5_0000888 3 CH_nta_113 2 2 0.000329182
Pisum sativum chr6LG2 3 CH_psa_220 2 2 0.0000521635
Papaver somniferum NW_020648748.1 3 CH_pso_21 7 11 1.16611e-20
Papaver somniferum NC_039366.1 3 CH_pso_52 6 12 3.62221e-16
Quercus lobata 7 3 CH_qlo_126 5 5 3.1978e-16
Rosa chinensis RcHm_v2.0_Chr3 3 CH_rch_506 2 2 0.0000398653
Solanum tuberosum ST4.03ch11 3 CH_stu_113 4 7 0.0000000000141303
Avicennia marina ScioBoG_102841_HRSCAF_103114 4 CH_ama_82 2 2 0.000258665
Eucalyptus grandis Chr01 4 CH_egr_378 3 3 0.00000000513834
Medicago truncatula chr1 4 CH_mtr_496 2 2 0.0000410863
Nicotiana tabacum Nitab4.5_0000888 4 CH_nta_113 2 2 0.000329182
Pisum sativum chr6LG2 4 CH_psa_220 2 2 0.0000521635
Papaver somniferum NW_020648748.1 4 CH_pso_21 7 11 1.16611e-20
Papaver somniferum NC_039366.1 4 CH_pso_52 6 12 3.62221e-16
Quercus lobata 7 4 CH_qlo_126 5 5 3.1978e-16
Rosa chinensis RcHm_v2.0_Chr3 4 CH_rch_506 2 2 0.0000398653
Solanum tuberosum ST4.03ch11 4 CH_stu_113 4 7 0.0000000000141303

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001