Functional clusters
Information
- Type Gene Ontology
- Description cellular response to manganese ion
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Actinidia chinensis | Lachesis_group26 | 3 | CH_ach_172 | 2 | 2 | 0.000162964 |
Camellia sinensis var. sinensis | Chr4 | 3 | CH_camsi_506 | 2 | 2 | 0.0000458547 |
Capsicum annuum | PGAv.1.6.scaffold1054 | 3 | CH_can_298 | 2 | 2 | 0.0000826105 |
Coffea canephora | chr10 | 3 | CH_ccan_299 | 2 | 14 | 0.000234235 |
Erigeron canadensis | Conyza_canadensis_scaffold:7 | 3 | CH_eca_311 | 2 | 3 | 0.000134614 |
Lactuca sativa | Lsat_1_v8_lg_1 | 3 | CH_lsa_507 | 2 | 4 | 0.000925133 |
Petunia axillaris | Peaxi162Scf00081 | 3 | CH_pax_53 | 3 | 3 | 0.00000000742514 |
Punica granatum | NC_045127.1 | 3 | CH_pgr_317 | 2 | 2 | 0.000225107 |
Quercus lobata | CM012294 | 3 | CH_qlo_816 | 2 | 3 | 0.000154883 |
Rhododendron simsii | chr06 | 3 | CH_rsi_416 | 2 | 2 | 0.000193592 |
Sequoiadendron giganteum | chr3 | 3 | CH_sgi_516 | 3 | 4 | 0.000000014239 |
Solanum pennellii | Spenn-ch04 | 3 | CH_spe_277 | 2 | 2 | 0.000044479 |
Vaccinium macrocarpon | chr10_Vaccinium_macrocarpon_Stevens_v1 | 3 | CH_vma_224 | 2 | 2 | 0.0000929238 |
Actinidia chinensis | Lachesis_group26 | 4 | CH_ach_172 | 2 | 2 | 0.000162964 |
Camellia sinensis var. sinensis | Chr4 | 4 | CH_camsi_506 | 2 | 2 | 0.0000458547 |
Capsicum annuum | PGAv.1.6.scaffold1054 | 4 | CH_can_298 | 2 | 2 | 0.0000826105 |
Coffea canephora | chr10 | 4 | CH_ccan_299 | 2 | 14 | 0.000234235 |
Erigeron canadensis | Conyza_canadensis_scaffold:7 | 4 | CH_eca_311 | 2 | 3 | 0.000134614 |
Lactuca sativa | Lsat_1_v8_lg_1 | 4 | CH_lsa_507 | 2 | 4 | 0.000925133 |
Petunia axillaris | Peaxi162Scf00081 | 4 | CH_pax_53 | 3 | 3 | 0.00000000742514 |
Punica granatum | NC_045127.1 | 4 | CH_pgr_317 | 2 | 2 | 0.000225107 |
Quercus lobata | CM012294 | 4 | CH_qlo_816 | 2 | 3 | 0.000154883 |
Rhododendron simsii | chr06 | 4 | CH_rsi_416 | 2 | 2 | 0.000193592 |
Sequoiadendron giganteum | chr3 | 4 | CH_sgi_516 | 3 | 4 | 0.000000014239 |
Solanum pennellii | Spenn-ch04 | 4 | CH_spe_277 | 2 | 2 | 0.000044479 |
Vaccinium macrocarpon | chr10_Vaccinium_macrocarpon_Stevens_v1 | 4 | CH_vma_224 | 2 | 2 | 0.0000929238 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |