Functional clusters

Information

  • Type Gene Ontology
  • Description cellular response to manganese ion

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group26 3 CH_ach_172 2 2 0.000162964
Camellia sinensis var. sinensis Chr4 3 CH_camsi_506 2 2 0.0000458547
Capsicum annuum PGAv.1.6.scaffold1054 3 CH_can_298 2 2 0.0000826105
Coffea canephora chr10 3 CH_ccan_299 2 14 0.000234235
Erigeron canadensis Conyza_canadensis_scaffold:7 3 CH_eca_311 2 3 0.000134614
Lactuca sativa Lsat_1_v8_lg_1 3 CH_lsa_507 2 4 0.000925133
Petunia axillaris Peaxi162Scf00081 3 CH_pax_53 3 3 0.00000000742514
Punica granatum NC_045127.1 3 CH_pgr_317 2 2 0.000225107
Quercus lobata CM012294 3 CH_qlo_816 2 3 0.000154883
Rhododendron simsii chr06 3 CH_rsi_416 2 2 0.000193592
Sequoiadendron giganteum chr3 3 CH_sgi_516 3 4 0.000000014239
Solanum pennellii Spenn-ch04 3 CH_spe_277 2 2 0.000044479
Vaccinium macrocarpon chr10_Vaccinium_macrocarpon_Stevens_v1 3 CH_vma_224 2 2 0.0000929238
Actinidia chinensis Lachesis_group26 4 CH_ach_172 2 2 0.000162964
Camellia sinensis var. sinensis Chr4 4 CH_camsi_506 2 2 0.0000458547
Capsicum annuum PGAv.1.6.scaffold1054 4 CH_can_298 2 2 0.0000826105
Coffea canephora chr10 4 CH_ccan_299 2 14 0.000234235
Erigeron canadensis Conyza_canadensis_scaffold:7 4 CH_eca_311 2 3 0.000134614
Lactuca sativa Lsat_1_v8_lg_1 4 CH_lsa_507 2 4 0.000925133
Petunia axillaris Peaxi162Scf00081 4 CH_pax_53 3 3 0.00000000742514
Punica granatum NC_045127.1 4 CH_pgr_317 2 2 0.000225107
Quercus lobata CM012294 4 CH_qlo_816 2 3 0.000154883
Rhododendron simsii chr06 4 CH_rsi_416 2 2 0.000193592
Sequoiadendron giganteum chr3 4 CH_sgi_516 3 4 0.000000014239
Solanum pennellii Spenn-ch04 4 CH_spe_277 2 2 0.000044479
Vaccinium macrocarpon chr10_Vaccinium_macrocarpon_Stevens_v1 4 CH_vma_224 2 2 0.0000929238

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001