Functional clusters
Information
- Type Gene Ontology
- Description hydrogen peroxide-mediated programmed cell death
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Brassica napus | C05 | 3 | CH_bna_488 | 2 | 3 | 0.000167052 |
| Brassica oleracea | C5 | 3 | CH_bol_365 | 2 | 3 | 0.000588328 |
| Daucus carota | DCARv2_Chr6 | 3 | CH_dca_124 | 3 | 3 | 0.000000213555 |
| Durio zibethinus | NW_019168481.1 | 3 | CH_dzi_20 | 5 | 5 | 7.26938e-16 |
| Lonicera japonica | GWHAAZE00000001 | 3 | CH_lonja_187 | 4 | 15 | 0.00000000439554 |
| Manihot esculenta | Chromosome10 | 3 | CH_mes_105 | 4 | 4 | 0.0000000000478185 |
| Manihot esculenta | Chromosome07 | 3 | CH_mes_178 | 3 | 3 | 0.000000313221 |
| Medicago truncatula | chr3 | 3 | CH_mtr_740 | 2 | 3 | 0.000739518 |
| Oryza sativa ssp. japonica | chr05 | 3 | CH_osa_353 | 2 | 2 | 0.000158437 |
| Quercus lobata | 1 | 3 | CH_qlo_127 | 6 | 10 | 3.63914e-16 |
| Salix brachista | GWHAAZH00000001 | 3 | CH_sbr_139 | 3 | 4 | 0.000000238234 |
| Theobroma cacao | Chromosome_9 | 3 | CH_tca_331 | 2 | 2 | 0.000219716 |
| Tarenaya hassleriana | NW_010965372.1 | 3 | CH_tha_161 | 2 | 2 | 0.000419082 |
| Brassica napus | C05 | 4 | CH_bna_488 | 2 | 3 | 0.000167052 |
| Brassica oleracea | C5 | 4 | CH_bol_365 | 2 | 3 | 0.000588328 |
| Daucus carota | DCARv2_Chr6 | 4 | CH_dca_124 | 3 | 3 | 0.000000213555 |
| Durio zibethinus | NW_019168481.1 | 4 | CH_dzi_20 | 5 | 5 | 7.26938e-16 |
| Lonicera japonica | GWHAAZE00000001 | 4 | CH_lonja_187 | 4 | 15 | 0.00000000439554 |
| Manihot esculenta | Chromosome10 | 4 | CH_mes_105 | 4 | 4 | 0.0000000000478185 |
| Manihot esculenta | Chromosome07 | 4 | CH_mes_178 | 3 | 3 | 0.000000313221 |
| Medicago truncatula | chr3 | 4 | CH_mtr_740 | 2 | 3 | 0.000739518 |
| Oryza sativa ssp. japonica | chr05 | 4 | CH_osa_353 | 2 | 2 | 0.000158437 |
| Quercus lobata | 1 | 4 | CH_qlo_127 | 6 | 10 | 3.63914e-16 |
| Salix brachista | GWHAAZH00000001 | 4 | CH_sbr_139 | 3 | 4 | 0.000000238234 |
| Theobroma cacao | Chromosome_9 | 4 | CH_tca_331 | 2 | 2 | 0.000219716 |
| Tarenaya hassleriana | NW_010965372.1 | 4 | CH_tha_161 | 2 | 2 | 0.000419082 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |