Functional clusters
Information
- Type Gene Ontology
- Description response to desiccation
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Cardamine hirsuta | Chr3 | 3 | CH_chi_129 | 5 | 23 | 0.000000242342 |
| Daucus carota | DCARv2_Chr7 | 3 | CH_dca_260 | 3 | 3 | 0.0000865811 |
| Erigeron canadensis | Conyza_canadensis_scaffold:3 | 3 | CH_eca_229 | 3 | 3 | 0.0000234681 |
| Fragaria x ananassa | Fvb7-2 | 3 | CH_fan_318 | 3 | 3 | 0.0000319426 |
| Fragaria x ananassa | Fvb7-2 | 3 | CH_fan_319 | 3 | 3 | 0.0000319426 |
| Fragaria vesca | Fvb7 | 3 | CH_fve_210 | 3 | 3 | 0.0000152269 |
| Lactuca sativa | Lsat_1_v8_lg_7 | 3 | CH_lsa_314 | 3 | 3 | 0.0000307936 |
| Malus domestica | Chr01 | 3 | CH_mdo_372 | 3 | 3 | 0.0000266203 |
| Prunus persica | Pp02 | 3 | CH_ppe_168 | 4 | 4 | 0.0000000157547 |
| Papaver somniferum | NW_020650304.1 | 3 | CH_pso_182 | 5 | 10 | 0.00000000314248 |
| Papaver somniferum | NC_039368.1 | 3 | CH_pso_226 | 6 | 42 | 0.0000000412905 |
| Rosa chinensis | RcHm_v2.0_Chr1 | 3 | CH_rch_412 | 3 | 3 | 0.00000619815 |
| Vitis vinifera | chr15 | 3 | CH_vvi_232 | 3 | 3 | 0.0000175657 |
| Cardamine hirsuta | Chr3 | 4 | CH_chi_129 | 5 | 23 | 0.000000242342 |
| Daucus carota | DCARv2_Chr7 | 4 | CH_dca_260 | 3 | 3 | 0.0000865811 |
| Erigeron canadensis | Conyza_canadensis_scaffold:3 | 4 | CH_eca_229 | 3 | 3 | 0.0000234681 |
| Fragaria x ananassa | Fvb7-2 | 4 | CH_fan_318 | 3 | 3 | 0.0000319426 |
| Fragaria x ananassa | Fvb7-2 | 4 | CH_fan_319 | 3 | 3 | 0.0000319426 |
| Fragaria vesca | Fvb7 | 4 | CH_fve_210 | 3 | 3 | 0.0000152269 |
| Lactuca sativa | Lsat_1_v8_lg_7 | 4 | CH_lsa_314 | 3 | 3 | 0.0000307936 |
| Malus domestica | Chr01 | 4 | CH_mdo_372 | 3 | 3 | 0.0000266203 |
| Prunus persica | Pp02 | 4 | CH_ppe_168 | 4 | 4 | 0.0000000157547 |
| Papaver somniferum | NW_020650304.1 | 4 | CH_pso_182 | 5 | 10 | 0.00000000314248 |
| Papaver somniferum | NC_039368.1 | 4 | CH_pso_226 | 6 | 42 | 0.0000000412905 |
| Rosa chinensis | RcHm_v2.0_Chr1 | 4 | CH_rch_412 | 3 | 3 | 0.00000619815 |
| Vitis vinifera | chr15 | 4 | CH_vvi_232 | 3 | 3 | 0.0000175657 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |