Functional clusters

Information

  • Type Gene Ontology
  • Description response to sodium phosphate

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amaranthus hybridus AmaHy_arrow1_Scaffold_6 3 CH_amhyb_114 2 2 0.0000841751
Brassica carinata ChrC08 3 CH_bca_833 2 2 0.000448905
Camellia sinensis var. sinensis Chr7 3 CH_camsi_523 2 2 0.0000458547
Cannabis sativa NC_044373.1 3 CH_cansat_230 2 2 0.0000656642
Capsicum annuum PGAv.1.6.scaffold375 3 CH_can_383 2 2 0.000247831
Citrus clementina scaffold_3 3 CH_ccl_15 9 10 2.90959e-29
Cardamine hirsuta Chr2 3 CH_chi_237 2 2 0.0000691204
Carica papaya supercontig_97 3 CH_cpa_15 4 4 0.00000000000257786
Daucus carota DCARv2_Chr8 3 CH_dca_119 3 3 0.000000122031
Daucus carota DCARv2_Chr2 3 CH_dca_414 2 2 0.000956663
Durio zibethinus NW_019167993.1 3 CH_dzi_262 2 4 0.00027808
Erigeron canadensis Conyza_canadensis_scaffold:3 3 CH_eca_33 4 5 0.00000000000135533
Eucalyptus grandis Chr06 3 CH_egr_143 5 5 8.80189e-17
Erythranthe guttata scaffold_8 3 CH_egut_343 2 2 0.000218444
Fragaria x ananassa Fvb3-3 3 CH_fan_169 3 6 0.000000359466
Fragaria vesca Fvb3 3 CH_fve_25 5 6 5.42047e-16
Glycine max Gm13 3 CH_gma_289 2 2 0.0000379557
Gossypium raimondii Chr11 3 CH_gra_301 2 2 0.000321664
Helianthus annuus HanXRQChr17 3 CH_han_121 4 4 0.0000000000218135
Hydrangea macrophylla Hma1.2p1_0290F.1 3 CH_hma_208 2 2 0.000111086
Lactuca sativa Lsat_1_v8_lg_7 3 CH_lsa_50 5 6 0.00000000000000188489
Magnolia biondii Chr06 3 CH_mbi_14 7 12 8.18615e-22
Malus domestica Chr11 3 CH_mdo_86 4 6 0.0000000000122694
Manihot esculenta Chromosome15 3 CH_mes_35 6 7 1.3375e-19
Medicago truncatula chr2 3 CH_mtr_125 4 7 0.00000000000728251
Nicotiana tabacum Nitab4.5_0000246 3 CH_nta_110 2 3 0.000329164
Petunia axillaris Peaxi162Scf00069 3 CH_pax_212 2 2 0.0000703556
Punica granatum NC_045133.1 3 CH_pgr_274 2 2 0.0000750356
Prunus persica Pp04 3 CH_ppe_115 4 8 0.0000000000871674
Papaver somniferum NC_039368.1 3 CH_pso_120 4 8 0.0000000000360182
Populus trichocarpa Chr11 3 CH_ptr_129 4 6 0.000000000608176
Phaseolus vulgaris Chr05 3 CH_pvu_177 3 17 0.00000550357
Rosa chinensis RcHm_v2.0_Chr5 3 CH_rch_58 6 13 3.88775e-18
Salix brachista GWHAAZH00000011 3 CH_sbr_76 4 7 0.00000000183851
Solanum lycopersicum SL4.0ch07 3 CH_sly_443 2 2 0.000176082
Solanum pennellii Spenn-ch07 3 CH_spe_345 2 2 0.000133437
Solanum tuberosum ST4.03ch07 3 CH_stu_473 2 2 0.000153736
Trochodendron aralioides group3 3 CH_tar_386 2 4 0.000360198
Vigna mungo CM024079.1 3 CH_vmu_226 2 3 0.000193836
Amaranthus hybridus AmaHy_arrow1_Scaffold_6 4 CH_amhyb_114 2 2 0.0000841751
Brassica carinata ChrC08 4 CH_bca_833 2 2 0.000448905
Camellia sinensis var. sinensis Chr7 4 CH_camsi_523 2 2 0.0000458547
Cannabis sativa NC_044373.1 4 CH_cansat_230 2 2 0.0000656642
Capsicum annuum PGAv.1.6.scaffold375 4 CH_can_383 2 2 0.000247831
Citrus clementina scaffold_3 4 CH_ccl_15 9 10 2.90959e-29
Cardamine hirsuta Chr2 4 CH_chi_237 2 2 0.0000691204
Carica papaya supercontig_97 4 CH_cpa_15 4 4 0.00000000000257786
Daucus carota DCARv2_Chr8 4 CH_dca_119 3 3 0.000000122031
Daucus carota DCARv2_Chr2 4 CH_dca_414 2 2 0.000956663
Durio zibethinus NW_019167993.1 4 CH_dzi_262 2 4 0.00027808
Erigeron canadensis Conyza_canadensis_scaffold:3 4 CH_eca_33 4 5 0.00000000000135533
Eucalyptus grandis Chr06 4 CH_egr_143 5 5 8.80189e-17
Erythranthe guttata scaffold_8 4 CH_egut_343 2 2 0.000218444
Fragaria x ananassa Fvb3-3 4 CH_fan_169 3 6 0.000000359466
Fragaria vesca Fvb3 4 CH_fve_25 5 6 5.42047e-16
Glycine max Gm13 4 CH_gma_289 2 2 0.0000379557
Gossypium raimondii Chr11 4 CH_gra_301 2 2 0.000321664
Helianthus annuus HanXRQChr17 4 CH_han_121 4 4 0.0000000000218135
Hydrangea macrophylla Hma1.2p1_0290F.1 4 CH_hma_208 2 2 0.000111086
Lactuca sativa Lsat_1_v8_lg_7 4 CH_lsa_50 5 6 0.00000000000000188489
Magnolia biondii Chr06 4 CH_mbi_14 7 12 8.18615e-22
Malus domestica Chr11 4 CH_mdo_86 4 6 0.0000000000122694
Manihot esculenta Chromosome15 4 CH_mes_35 6 7 1.3375e-19
Medicago truncatula chr2 4 CH_mtr_125 4 7 0.00000000000728251
Nicotiana tabacum Nitab4.5_0000246 4 CH_nta_110 2 3 0.000329164
Petunia axillaris Peaxi162Scf00069 4 CH_pax_212 2 2 0.0000703556
Punica granatum NC_045133.1 4 CH_pgr_274 2 2 0.0000750356
Prunus persica Pp04 4 CH_ppe_115 4 8 0.0000000000871674
Papaver somniferum NC_039368.1 4 CH_pso_120 4 8 0.0000000000360182
Populus trichocarpa Chr11 4 CH_ptr_129 4 6 0.000000000608176
Phaseolus vulgaris Chr05 4 CH_pvu_177 3 17 0.00000550357
Rosa chinensis RcHm_v2.0_Chr5 4 CH_rch_58 6 13 3.88775e-18
Salix brachista GWHAAZH00000011 4 CH_sbr_76 4 7 0.00000000183851
Solanum lycopersicum SL4.0ch07 4 CH_sly_443 2 2 0.000176082
Solanum pennellii Spenn-ch07 4 CH_spe_345 2 2 0.000133437
Solanum tuberosum ST4.03ch07 4 CH_stu_473 2 2 0.000153736
Trochodendron aralioides group3 4 CH_tar_386 2 4 0.000360198
Vigna mungo CM024079.1 4 CH_vmu_226 2 3 0.000193836

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001