Functional clusters

Information

  • Type Gene Ontology
  • Description peptidase activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr3 3 CH_acertr_414 6 11 0.000294948
Brassica napus A01 3 CH_bna_55 12 16 0.000000000000427061
Brassica oleracea C1 3 CH_bol_197 8 15 0.00000528626
Camellia sinensis var. sinensis Chr1 3 CH_camsi_109 11 18 0.0000000000224529
Eucalyptus grandis Chr04 3 CH_egr_833 11 59 0.000431569
Lupinus albus Lalb_Chr21 3 CH_lal_91 11 23 0.000000024762
Lonicera japonica GWHAAZE00000002 3 CH_lonja_308 8 15 0.00000320265
Medicago truncatula chr7 3 CH_mtr_286 13 58 0.000000101925
Nelumbo nucifera chr6 3 CH_nnu_80 10 25 0.0000000354365
Punica granatum NC_045134.1 3 CH_pgr_210 6 7 0.00000938594
Punica granatum NC_045132.1 3 CH_pgr_246 5 5 0.0000710977
Pisum sativum chr5LG3 3 CH_psa_249 7 18 0.0000719599
Quercus lobata 4 3 CH_qlo_225 17 58 0.0000000000107335
Quercus lobata 8 3 CH_qlo_242 10 13 0.0000000000460728
Vigna mungo CM024076.1 3 CH_vmu_108 9 21 0.00000120478
Acer truncatum chr3 4 CH_acertr_414 6 11 0.000294948
Brassica napus A01 4 CH_bna_55 12 16 0.000000000000427061
Brassica oleracea C1 4 CH_bol_197 8 15 0.00000528626
Camellia sinensis var. sinensis Chr1 4 CH_camsi_109 11 18 0.0000000000224529
Eucalyptus grandis Chr04 4 CH_egr_833 11 59 0.000431569
Lupinus albus Lalb_Chr21 4 CH_lal_91 11 23 0.000000024762
Lonicera japonica GWHAAZE00000002 4 CH_lonja_308 8 15 0.00000320265
Medicago truncatula chr7 4 CH_mtr_286 13 58 0.000000101925
Nelumbo nucifera chr6 4 CH_nnu_80 10 25 0.0000000354365
Punica granatum NC_045134.1 4 CH_pgr_210 6 7 0.00000938594
Punica granatum NC_045132.1 4 CH_pgr_246 5 5 0.0000710977
Pisum sativum chr5LG3 4 CH_psa_249 7 18 0.0000719599
Quercus lobata 4 4 CH_qlo_225 17 58 0.0000000000107335
Quercus lobata 8 4 CH_qlo_242 10 13 0.0000000000460728
Vigna mungo CM024076.1 4 CH_vmu_108 9 21 0.00000120478

Available child term results

Ontology identifier Description Number of clusters
GO:0003923 GPI-anchor transamidase activity 14
GO:0004175 endopeptidase activity 18
GO:0004176 ATP-dependent peptidase activity 48
GO:0004177 aminopeptidase activity 10
GO:0004180 carboxypeptidase activity 6
GO:0004181 metallocarboxypeptidase activity 12
GO:0004185 serine-type carboxypeptidase activity 474
GO:0004190 aspartic-type endopeptidase activity 424
GO:0004197 cysteine-type endopeptidase activity 48
GO:0004198 calcium-dependent cysteine-type endopeptidase activity 10
GO:0004222 metalloendopeptidase activity 34
GO:0004252 serine-type endopeptidase activity 472
GO:0004298 threonine-type endopeptidase activity 4
GO:0004843 thiol-dependent deubiquitinase 36
GO:0008234 cysteine-type peptidase activity 168
GO:0008235 metalloexopeptidase activity 6
GO:0008236 serine-type peptidase activity 100
GO:0008237 metallopeptidase activity 2
GO:0008238 exopeptidase activity 4
GO:0008239 dipeptidyl-peptidase activity 14
GO:0008240 tripeptidyl-peptidase activity 6
GO:0008242 omega peptidase activity 12
GO:0016805 dipeptidase activity 24
GO:0016920 pyroglutamyl-peptidase activity 8
GO:0019784 NEDD8-specific protease activity 12
GO:0034722 gamma-glutamyl-peptidase activity 34
GO:0036374 glutathione hydrolase activity 44
GO:0061578 Lys63-specific deubiquitinase activity 20
GO:0070003 threonine-type peptidase activity 2
GO:0070006 metalloaminopeptidase activity 8
GO:0070008 serine-type exopeptidase activity 2
GO:0070009 serine-type aminopeptidase activity 34
GO:0070122 isopeptidase activity 4
GO:0070139 SUMO-specific endopeptidase activity 2
GO:0101005 deubiquitinase activity 2
GO:1990380 Lys48-specific deubiquitinase activity 20

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001