Functional clusters
Information
- Type Gene Ontology
- Description cysteine-type peptidase activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Anthoceros agrestis | Sc2ySwM_362 | 3 | CH_aag_36 | 9 | 54 | 0.00000000802603 |
| Anthoceros agrestis | Sc2ySwM_340 | 3 | CH_aag_89 | 5 | 14 | 0.0000266825 |
| Acer truncatum | chr13 | 3 | CH_acertr_255 | 5 | 13 | 0.0000184609 |
| Actinidia chinensis | Lachesis_group5 | 3 | CH_ach_34 | 8 | 29 | 0.0000000190233 |
| Actinidia chinensis | Lachesis_group27 | 3 | CH_ach_53 | 5 | 6 | 0.000000362991 |
| Actinidia chinensis | Lachesis_group19 | 3 | CH_ach_8 | 9 | 11 | 0.00000000000000111035 |
| Amborella trichopoda | AmTr_v1.0_scaffold00021 | 3 | CH_atr_136 | 4 | 4 | 0.00000263092 |
| Amborella trichopoda | AmTr_v1.0_scaffold00061 | 3 | CH_atr_37 | 7 | 8 | 0.000000000000600748 |
| Brassica napus | A09 | 3 | CH_bna_233 | 7 | 14 | 0.000000839277 |
| Brassica napus | C04 | 3 | CH_bna_446 | 9 | 55 | 0.0000767567 |
| Brassica oleracea | C4 | 3 | CH_bol_239 | 9 | 49 | 0.0000297644 |
| Corylus avellana | 2 | 3 | CH_cav_111 | 8 | 51 | 0.000000147683 |
| Coffea canephora | chr6 | 3 | CH_ccan_80 | 5 | 39 | 0.0000000694946 |
| Cardamine hirsuta | Chr5 | 3 | CH_chi_390 | 7 | 63 | 0.000787432 |
| Cardamine hirsuta | Chr1 | 3 | CH_chi_79 | 7 | 13 | 0.00000000300578 |
| Citrullus lanatus | CG_Chr08 | 3 | CH_cla_122 | 4 | 8 | 0.000253588 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1829 | 3 | CH_cqu_321 | 7 | 35 | 0.000034431 |
| Cucumis sativus L. | chr3 | 3 | CH_csa_238 | 4 | 8 | 0.000281653 |
| Davidia involucrata | GWHABJS00000001 | 3 | CH_din_111 | 9 | 53 | 0.0000000972784 |
| Davidia involucrata | GWHABJS00000020 | 3 | CH_din_147 | 7 | 26 | 0.000000846487 |
| Durio zibethinus | NW_019168470.1 | 3 | CH_dzi_82 | 6 | 9 | 0.00000000699824 |
| Erigeron canadensis | Conyza_canadensis_scaffold:3 | 3 | CH_eca_67 | 7 | 17 | 0.00000000136183 |
| Eucalyptus grandis | Chr03 | 3 | CH_egr_197 | 8 | 9 | 0.0000000000000507688 |
| Eucalyptus grandis | Chr05 | 3 | CH_egr_51 | 14 | 19 | 4.0137e-25 |
| Eucalyptus grandis | Chr02 | 3 | CH_egr_525 | 5 | 7 | 0.00000136751 |
| Gossypium hirsutum | D04 | 3 | CH_ghi_146 | 6 | 6 | 0.000000000249711 |
| Gossypium hirsutum | A05 | 3 | CH_ghi_182 | 6 | 8 | 0.00000000694602 |
| Gossypium hirsutum | D05 | 3 | CH_ghi_24 | 15 | 21 | 2.01822e-27 |
| Gossypium hirsutum | A04 | 3 | CH_ghi_260 | 5 | 6 | 0.000000389746 |
| Gossypium hirsutum | D02 | 3 | CH_ghi_275 | 6 | 15 | 0.00000121333 |
| Glycine max | Gm06 | 3 | CH_gma_18 | 17 | 61 | 5.77078e-22 |
| Glycine max | Gm12 | 3 | CH_gma_27 | 9 | 9 | 1.94954e-17 |
| Gossypium raimondii | Chr09 | 3 | CH_gra_14 | 12 | 16 | 1.14616e-21 |
| Gossypium raimondii | Chr12 | 3 | CH_gra_146 | 5 | 7 | 0.000000902818 |
| Helianthus annuus | HanXRQChr04 | 3 | CH_han_3 | 26 | 78 | 6.77067e-37 |
| Helianthus annuus | HanXRQChr02 | 3 | CH_han_302 | 5 | 6 | 0.000000622894 |
| Helianthus annuus | HanXRQChr16 | 3 | CH_han_33 | 10 | 10 | 1.88694e-19 |
| Hydrangea macrophylla | Hma1.2p1_0155F.1 | 3 | CH_hma_39 | 5 | 5 | 0.0000000102103 |
| Lotus japonicus | chr6 | 3 | CH_lja_305 | 6 | 28 | 0.000390924 |
| Lonicera japonica | GWHAAZE00000008 | 3 | CH_lonja_163 | 6 | 7 | 0.000000000721416 |
| Lonicera japonica | GWHAAZE00000001 | 3 | CH_lonja_285 | 6 | 17 | 0.00000123508 |
| Lonicera japonica | GWHAAZE00000001 | 3 | CH_lonja_365 | 6 | 28 | 0.0000362904 |
| Lonicera japonica | GWHAAZE00000004 | 3 | CH_lonja_51 | 10 | 11 | 2.05341e-19 |
| Lactuca sativa | Lsat_1_v8_lg_1 | 3 | CH_lsa_234 | 5 | 6 | 0.00000164055 |
| Magnolia biondii | Chr07 | 3 | CH_mbi_105 | 7 | 10 | 0.000000000217307 |
| Magnolia biondii | Chr19 | 3 | CH_mbi_364 | 6 | 21 | 0.0000206463 |
| Magnolia biondii | Chr10 | 3 | CH_mbi_566 | 5 | 16 | 0.000370123 |
| Malus domestica | Chr09 | 3 | CH_mdo_106 | 7 | 11 | 0.000000000230167 |
| Malus domestica | Chr10 | 3 | CH_mdo_143 | 6 | 8 | 0.00000000513342 |
| Malus domestica | Chr17 | 3 | CH_mdo_169 | 6 | 9 | 0.0000000153494 |
| Malus domestica | Chr05 | 3 | CH_mdo_194 | 5 | 5 | 0.0000000479447 |
| Malus domestica | Chr04 | 3 | CH_mdo_508 | 5 | 15 | 0.000139401 |
| Medicago truncatula | chr2 | 3 | CH_mtr_409 | 7 | 41 | 0.0000070612 |
| Medicago truncatula | chr4 | 3 | CH_mtr_637 | 7 | 67 | 0.000252259 |
| Nelumbo nucifera | chr1 | 3 | CH_nnu_276 | 6 | 44 | 0.000347568 |
| Nelumbo nucifera | chr1 | 3 | CH_nnu_8 | 14 | 15 | 7.80093e-30 |
| Olea europaea | chr16 | 3 | CH_oeu_265 | 4 | 4 | 0.000307102 |
| Oryza sativa ssp. japonica | chr09 | 3 | CH_osa_114 | 6 | 8 | 0.0000000136123 |
| Petunia axillaris | Peaxi162Scf00261 | 3 | CH_pax_357 | 4 | 10 | 0.000991812 |
| Punica granatum | NC_045131.1 | 3 | CH_pgr_45 | 10 | 33 | 0.00000000000064685 |
| Prunus persica | Pp03 | 3 | CH_ppe_144 | 10 | 40 | 0.00000000219775 |
| Prunus persica | Pp05 | 3 | CH_ppe_289 | 9 | 73 | 0.0000333564 |
| Pisum sativum | chr1LG6 | 3 | CH_psa_30 | 11 | 49 | 0.0000000000000892623 |
| Populus trichocarpa | Chr07 | 3 | CH_ptr_263 | 6 | 20 | 0.00000525973 |
| Populus trichocarpa | Chr04 | 3 | CH_ptr_30 | 11 | 12 | 1.42843e-21 |
| Phaseolus vulgaris | Chr11 | 3 | CH_pvu_154 | 5 | 8 | 0.00000128912 |
| Phaseolus vulgaris | Chr11 | 3 | CH_pvu_27 | 14 | 46 | 5.10475e-19 |
| Quercus lobata | 5 | 3 | CH_qlo_1022 | 4 | 10 | 0.00082766 |
| Quercus lobata | 4 | 3 | CH_qlo_175 | 7 | 7 | 0.000000000000118975 |
| Rosa chinensis | RcHm_v2.0_Chr5 | 3 | CH_rch_247 | 10 | 68 | 0.0000000285867 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 3 | CH_rch_327 | 6 | 13 | 0.000000604572 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 3 | CH_rch_400 | 9 | 80 | 0.00000508902 |
| Rosa chinensis | RcHm_v2.0_Chr1 | 3 | CH_rch_660 | 4 | 6 | 0.000283941 |
| Rhododendron simsii | chr13 | 3 | CH_rsi_196 | 5 | 5 | 0.0000000908644 |
| Salvia bowleyana | GWHASIU00000005 | 3 | CH_sbo_493 | 3 | 3 | 0.000787036 |
| Selaginella moellendorffii | scaffold_5 | 3 | CH_smo_43 | 7 | 20 | 0.0000000710242 |
| Theobroma cacao | Chromosome_6 | 3 | CH_tca_264 | 5 | 14 | 0.0000615392 |
| Tripterygium wilfordii | NC_052233.1 | 3 | CH_twi_123 | 5 | 6 | 0.000000470003 |
| Utricularia gibba | unitig_699 | 3 | CH_ugi_1 | 13 | 15 | 1.80959e-25 |
| Utricularia gibba | unitig_85 | 3 | CH_ugi_16 | 6 | 7 | 0.000000000885878 |
| Vigna mungo | CM024076.1 | 3 | CH_vmu_145 | 6 | 22 | 0.0000167111 |
| Vanilla planifolia | CM028155.1 | 3 | CH_vpl_61 | 5 | 5 | 0.0000000103979 |
| Zea mays | 9 | 3 | CH_zma_135 | 5 | 5 | 0.00000162197 |
| Zea mays | 9 | 3 | CH_zma_210 | 5 | 8 | 0.0000889498 |
| Anthoceros agrestis | Sc2ySwM_362 | 4 | CH_aag_36 | 9 | 54 | 0.00000000802603 |
| Anthoceros agrestis | Sc2ySwM_340 | 4 | CH_aag_89 | 5 | 14 | 0.0000266825 |
| Acer truncatum | chr13 | 4 | CH_acertr_255 | 5 | 13 | 0.0000184609 |
| Actinidia chinensis | Lachesis_group5 | 4 | CH_ach_34 | 8 | 29 | 0.0000000190233 |
| Actinidia chinensis | Lachesis_group27 | 4 | CH_ach_53 | 5 | 6 | 0.000000362991 |
| Actinidia chinensis | Lachesis_group19 | 4 | CH_ach_8 | 9 | 11 | 0.00000000000000111035 |
| Amborella trichopoda | AmTr_v1.0_scaffold00021 | 4 | CH_atr_136 | 4 | 4 | 0.00000263092 |
| Amborella trichopoda | AmTr_v1.0_scaffold00061 | 4 | CH_atr_37 | 7 | 8 | 0.000000000000600748 |
| Brassica napus | A09 | 4 | CH_bna_233 | 7 | 14 | 0.000000839277 |
| Brassica napus | C04 | 4 | CH_bna_446 | 9 | 55 | 0.0000767567 |
| Brassica oleracea | C4 | 4 | CH_bol_239 | 9 | 49 | 0.0000297644 |
| Corylus avellana | 2 | 4 | CH_cav_111 | 8 | 51 | 0.000000147683 |
| Coffea canephora | chr6 | 4 | CH_ccan_80 | 5 | 39 | 0.0000000694946 |
| Cardamine hirsuta | Chr5 | 4 | CH_chi_390 | 7 | 63 | 0.000787432 |
| Cardamine hirsuta | Chr1 | 4 | CH_chi_79 | 7 | 13 | 0.00000000300578 |
| Citrullus lanatus | CG_Chr08 | 4 | CH_cla_122 | 4 | 8 | 0.000253588 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1829 | 4 | CH_cqu_321 | 7 | 35 | 0.000034431 |
| Cucumis sativus L. | chr3 | 4 | CH_csa_238 | 4 | 8 | 0.000281653 |
| Davidia involucrata | GWHABJS00000001 | 4 | CH_din_111 | 9 | 53 | 0.0000000972784 |
| Davidia involucrata | GWHABJS00000020 | 4 | CH_din_147 | 7 | 26 | 0.000000846487 |
| Durio zibethinus | NW_019168470.1 | 4 | CH_dzi_82 | 6 | 9 | 0.00000000699824 |
| Erigeron canadensis | Conyza_canadensis_scaffold:3 | 4 | CH_eca_67 | 7 | 17 | 0.00000000136183 |
| Eucalyptus grandis | Chr03 | 4 | CH_egr_197 | 8 | 9 | 0.0000000000000507688 |
| Eucalyptus grandis | Chr05 | 4 | CH_egr_51 | 14 | 19 | 4.0137e-25 |
| Eucalyptus grandis | Chr02 | 4 | CH_egr_525 | 5 | 7 | 0.00000136751 |
| Gossypium hirsutum | D04 | 4 | CH_ghi_146 | 6 | 6 | 0.000000000249711 |
| Gossypium hirsutum | A05 | 4 | CH_ghi_182 | 6 | 8 | 0.00000000694602 |
| Gossypium hirsutum | D05 | 4 | CH_ghi_24 | 15 | 21 | 2.01822e-27 |
| Gossypium hirsutum | A04 | 4 | CH_ghi_260 | 5 | 6 | 0.000000389746 |
| Gossypium hirsutum | D02 | 4 | CH_ghi_275 | 6 | 15 | 0.00000121333 |
| Glycine max | Gm06 | 4 | CH_gma_18 | 17 | 61 | 5.77078e-22 |
| Glycine max | Gm12 | 4 | CH_gma_27 | 9 | 9 | 1.94954e-17 |
| Gossypium raimondii | Chr09 | 4 | CH_gra_14 | 12 | 16 | 1.14616e-21 |
| Gossypium raimondii | Chr12 | 4 | CH_gra_146 | 5 | 7 | 0.000000902818 |
| Helianthus annuus | HanXRQChr04 | 4 | CH_han_3 | 26 | 78 | 6.77067e-37 |
| Helianthus annuus | HanXRQChr02 | 4 | CH_han_302 | 5 | 6 | 0.000000622894 |
| Helianthus annuus | HanXRQChr16 | 4 | CH_han_33 | 10 | 10 | 1.88694e-19 |
| Hydrangea macrophylla | Hma1.2p1_0155F.1 | 4 | CH_hma_39 | 5 | 5 | 0.0000000102103 |
| Lotus japonicus | chr6 | 4 | CH_lja_305 | 6 | 28 | 0.000390924 |
| Lonicera japonica | GWHAAZE00000008 | 4 | CH_lonja_163 | 6 | 7 | 0.000000000721416 |
| Lonicera japonica | GWHAAZE00000001 | 4 | CH_lonja_285 | 6 | 17 | 0.00000123508 |
| Lonicera japonica | GWHAAZE00000001 | 4 | CH_lonja_365 | 6 | 28 | 0.0000362904 |
| Lonicera japonica | GWHAAZE00000004 | 4 | CH_lonja_51 | 10 | 11 | 2.05341e-19 |
| Lactuca sativa | Lsat_1_v8_lg_1 | 4 | CH_lsa_234 | 5 | 6 | 0.00000164055 |
| Magnolia biondii | Chr07 | 4 | CH_mbi_105 | 7 | 10 | 0.000000000217307 |
| Magnolia biondii | Chr19 | 4 | CH_mbi_364 | 6 | 21 | 0.0000206463 |
| Magnolia biondii | Chr10 | 4 | CH_mbi_566 | 5 | 16 | 0.000370123 |
| Malus domestica | Chr09 | 4 | CH_mdo_106 | 7 | 11 | 0.000000000230167 |
| Malus domestica | Chr10 | 4 | CH_mdo_143 | 6 | 8 | 0.00000000513342 |
| Malus domestica | Chr17 | 4 | CH_mdo_169 | 6 | 9 | 0.0000000153494 |
| Malus domestica | Chr05 | 4 | CH_mdo_194 | 5 | 5 | 0.0000000479447 |
| Malus domestica | Chr04 | 4 | CH_mdo_508 | 5 | 15 | 0.000139401 |
| Medicago truncatula | chr2 | 4 | CH_mtr_409 | 7 | 41 | 0.0000070612 |
| Medicago truncatula | chr4 | 4 | CH_mtr_637 | 7 | 67 | 0.000252259 |
| Nelumbo nucifera | chr1 | 4 | CH_nnu_276 | 6 | 44 | 0.000347568 |
| Nelumbo nucifera | chr1 | 4 | CH_nnu_8 | 14 | 15 | 7.80093e-30 |
| Olea europaea | chr16 | 4 | CH_oeu_265 | 4 | 4 | 0.000307102 |
| Oryza sativa ssp. japonica | chr09 | 4 | CH_osa_114 | 6 | 8 | 0.0000000136123 |
| Petunia axillaris | Peaxi162Scf00261 | 4 | CH_pax_357 | 4 | 10 | 0.000991812 |
| Punica granatum | NC_045131.1 | 4 | CH_pgr_45 | 10 | 33 | 0.00000000000064685 |
| Prunus persica | Pp03 | 4 | CH_ppe_144 | 10 | 40 | 0.00000000219775 |
| Prunus persica | Pp05 | 4 | CH_ppe_289 | 9 | 73 | 0.0000333564 |
| Pisum sativum | chr1LG6 | 4 | CH_psa_30 | 11 | 49 | 0.0000000000000892623 |
| Populus trichocarpa | Chr07 | 4 | CH_ptr_263 | 6 | 20 | 0.00000525973 |
| Populus trichocarpa | Chr04 | 4 | CH_ptr_30 | 11 | 12 | 1.42843e-21 |
| Phaseolus vulgaris | Chr11 | 4 | CH_pvu_154 | 5 | 8 | 0.00000128912 |
| Phaseolus vulgaris | Chr11 | 4 | CH_pvu_27 | 14 | 46 | 5.10475e-19 |
| Quercus lobata | 5 | 4 | CH_qlo_1022 | 4 | 10 | 0.00082766 |
| Quercus lobata | 4 | 4 | CH_qlo_175 | 7 | 7 | 0.000000000000118975 |
| Rosa chinensis | RcHm_v2.0_Chr5 | 4 | CH_rch_247 | 10 | 68 | 0.0000000285867 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 4 | CH_rch_327 | 6 | 13 | 0.000000604572 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 4 | CH_rch_400 | 9 | 80 | 0.00000508902 |
| Rosa chinensis | RcHm_v2.0_Chr1 | 4 | CH_rch_660 | 4 | 6 | 0.000283941 |
| Rhododendron simsii | chr13 | 4 | CH_rsi_196 | 5 | 5 | 0.0000000908644 |
| Salvia bowleyana | GWHASIU00000005 | 4 | CH_sbo_493 | 3 | 3 | 0.000787036 |
| Selaginella moellendorffii | scaffold_5 | 4 | CH_smo_43 | 7 | 20 | 0.0000000710242 |
| Theobroma cacao | Chromosome_6 | 4 | CH_tca_264 | 5 | 14 | 0.0000615392 |
| Tripterygium wilfordii | NC_052233.1 | 4 | CH_twi_123 | 5 | 6 | 0.000000470003 |
| Utricularia gibba | unitig_699 | 4 | CH_ugi_1 | 13 | 15 | 1.80959e-25 |
| Utricularia gibba | unitig_85 | 4 | CH_ugi_16 | 6 | 7 | 0.000000000885878 |
| Vigna mungo | CM024076.1 | 4 | CH_vmu_145 | 6 | 22 | 0.0000167111 |
| Vanilla planifolia | CM028155.1 | 4 | CH_vpl_61 | 5 | 5 | 0.0000000103979 |
| Zea mays | 9 | 4 | CH_zma_135 | 5 | 5 | 0.00000162197 |
| Zea mays | 9 | 4 | CH_zma_210 | 5 | 8 | 0.0000889498 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:0003923 | GPI-anchor transamidase activity | 14 |
| GO:0004197 | cysteine-type endopeptidase activity | 48 |
| GO:0004198 | calcium-dependent cysteine-type endopeptidase activity | 10 |
| GO:0004843 | thiol-dependent deubiquitinase | 36 |
| GO:0016920 | pyroglutamyl-peptidase activity | 8 |
| GO:0019784 | NEDD8-specific protease activity | 12 |
| GO:0034722 | gamma-glutamyl-peptidase activity | 34 |
| GO:0061578 | Lys63-specific deubiquitinase activity | 20 |
| GO:0070139 | SUMO-specific endopeptidase activity | 2 |
| GO:0101005 | deubiquitinase activity | 2 |
| GO:1990380 | Lys48-specific deubiquitinase activity | 20 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |