Functional clusters

Information

  • Type Gene Ontology
  • Description Lys48-specific deubiquitinase activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopoda AmTr_v1.0_scaffold00030 3 CH_atr_287 2 2 0.000476644
Brassica carinata ChrB01 3 CH_bca_463 3 9 0.0000209454
Carica papaya supercontig_29 3 CH_cpa_292 2 2 0.000950661
Daucus carota DCARv2_Chr6 3 CH_dca_375 2 2 0.000637775
Eucalyptus grandis Chr04 3 CH_egr_427 3 3 0.0000000513834
Fragaria x ananassa Fvb6-2 3 CH_fan_316 3 11 0.0000308245
Helianthus annuus HanXRQChr02 3 CH_han_673 2 2 0.000579643
Olea europaea chr10 3 CH_oeu_212 2 2 0.000160137
Rhododendron simsii chr11 3 CH_rsi_445 2 2 0.000387184
Zea mays 10 3 CH_zma_77 4 9 0.0000000249908
Amborella trichopoda AmTr_v1.0_scaffold00030 4 CH_atr_287 2 2 0.000476644
Brassica carinata ChrB01 4 CH_bca_463 3 9 0.0000209454
Carica papaya supercontig_29 4 CH_cpa_292 2 2 0.000950661
Daucus carota DCARv2_Chr6 4 CH_dca_375 2 2 0.000637775
Eucalyptus grandis Chr04 4 CH_egr_427 3 3 0.0000000513834
Fragaria x ananassa Fvb6-2 4 CH_fan_316 3 11 0.0000308245
Helianthus annuus HanXRQChr02 4 CH_han_673 2 2 0.000579643
Olea europaea chr10 4 CH_oeu_212 2 2 0.000160137
Rhododendron simsii chr11 4 CH_rsi_445 2 2 0.000387184
Zea mays 10 4 CH_zma_77 4 9 0.0000000249908

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001