Functional clusters
Information
- Type Gene Ontology
- Description ATP-dependent peptidase activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr8 | 3 | CH_acertr_480 | 3 | 5 | 0.000627697 |
| Aquilegia oxysepala | CHR01 | 3 | CH_aox_131 | 4 | 8 | 0.0000109175 |
| Brassica carinata | ChrC09 | 3 | CH_bca_223 | 4 | 4 | 0.0000000973498 |
| Brassica carinata | ChrC08 | 3 | CH_bca_606 | 3 | 3 | 0.0000979349 |
| Brassica napus | C06 | 3 | CH_bna_225 | 4 | 5 | 0.000000595319 |
| Brassica oleracea | C1 | 3 | CH_bol_105 | 4 | 4 | 0.0000000624074 |
| Chara braunii | BFEA01000353 | 3 | CH_cbr_164 | 3 | 7 | 0.000479928 |
| Cucumis melo | chr02 | 3 | CH_cme_159 | 3 | 3 | 0.000043693 |
| Eucalyptus grandis | Chr02 | 3 | CH_egr_652 | 3 | 3 | 0.0000366878 |
| Fragaria vesca | Fvb3 | 3 | CH_fve_337 | 4 | 27 | 0.000433331 |
| Glycine max | Gm12 | 3 | CH_gma_416 | 3 | 4 | 0.000359823 |
| Lupinus albus | Lalb_Chr01 | 3 | CH_lal_261 | 3 | 3 | 0.000086043 |
| Magnolia biondii | Chr04 | 3 | CH_mbi_222 | 4 | 6 | 0.000000269587 |
| Medicago truncatula | chr3 | 3 | CH_mtr_267 | 4 | 4 | 0.0000000440881 |
| Medicago truncatula | chr5 | 3 | CH_mtr_590 | 3 | 4 | 0.000186476 |
| Nicotiana tabacum | Nitab4.5_0000155 | 3 | CH_nta_150 | 3 | 6 | 0.0007291 |
| Petunia axillaris | Peaxi162Scf00330 | 3 | CH_pax_181 | 3 | 3 | 0.000044432 |
| Papaver somniferum | NC_039359.1 | 3 | CH_pso_151 | 6 | 20 | 0.000000000414764 |
| Quercus lobata | 3 | 3 | CH_qlo_496 | 4 | 6 | 0.000000565138 |
| Quercus lobata | 3 | 3 | CH_qlo_690 | 3 | 3 | 0.0000395044 |
| Rhododendron simsii | chr04 | 3 | CH_rsi_75 | 6 | 6 | 0.0000000000000228231 |
| Simmondsia chinensis | GWHAASQ00000012 | 3 | CH_sci_138 | 3 | 3 | 0.0000711727 |
| Vaccinium macrocarpon | chr7_Vaccinium_macrocarpon_Stevens_v1 | 3 | CH_vma_186 | 3 | 3 | 0.0000424336 |
| Vanilla planifolia | CM028157.1 | 3 | CH_vpl_179 | 3 | 3 | 0.0000536 |
| Acer truncatum | chr8 | 4 | CH_acertr_480 | 3 | 5 | 0.000627697 |
| Aquilegia oxysepala | CHR01 | 4 | CH_aox_131 | 4 | 8 | 0.0000109175 |
| Brassica carinata | ChrC09 | 4 | CH_bca_223 | 4 | 4 | 0.0000000973498 |
| Brassica carinata | ChrC08 | 4 | CH_bca_606 | 3 | 3 | 0.0000979349 |
| Brassica napus | C06 | 4 | CH_bna_225 | 4 | 5 | 0.000000595319 |
| Brassica oleracea | C1 | 4 | CH_bol_105 | 4 | 4 | 0.0000000624074 |
| Chara braunii | BFEA01000353 | 4 | CH_cbr_164 | 3 | 7 | 0.000479928 |
| Cucumis melo | chr02 | 4 | CH_cme_159 | 3 | 3 | 0.000043693 |
| Eucalyptus grandis | Chr02 | 4 | CH_egr_652 | 3 | 3 | 0.0000366878 |
| Fragaria vesca | Fvb3 | 4 | CH_fve_337 | 4 | 27 | 0.000433331 |
| Glycine max | Gm12 | 4 | CH_gma_416 | 3 | 4 | 0.000359823 |
| Lupinus albus | Lalb_Chr01 | 4 | CH_lal_261 | 3 | 3 | 0.000086043 |
| Magnolia biondii | Chr04 | 4 | CH_mbi_222 | 4 | 6 | 0.000000269587 |
| Medicago truncatula | chr3 | 4 | CH_mtr_267 | 4 | 4 | 0.0000000440881 |
| Medicago truncatula | chr5 | 4 | CH_mtr_590 | 3 | 4 | 0.000186476 |
| Nicotiana tabacum | Nitab4.5_0000155 | 4 | CH_nta_150 | 3 | 6 | 0.0007291 |
| Petunia axillaris | Peaxi162Scf00330 | 4 | CH_pax_181 | 3 | 3 | 0.000044432 |
| Papaver somniferum | NC_039359.1 | 4 | CH_pso_151 | 6 | 20 | 0.000000000414764 |
| Quercus lobata | 3 | 4 | CH_qlo_496 | 4 | 6 | 0.000000565138 |
| Quercus lobata | 3 | 4 | CH_qlo_690 | 3 | 3 | 0.0000395044 |
| Rhododendron simsii | chr04 | 4 | CH_rsi_75 | 6 | 6 | 0.0000000000000228231 |
| Simmondsia chinensis | GWHAASQ00000012 | 4 | CH_sci_138 | 3 | 3 | 0.0000711727 |
| Vaccinium macrocarpon | chr7_Vaccinium_macrocarpon_Stevens_v1 | 4 | CH_vma_186 | 3 | 3 | 0.0000424336 |
| Vanilla planifolia | CM028157.1 | 4 | CH_vpl_179 | 3 | 3 | 0.0000536 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |