Functional clusters
Information
- Type Gene Ontology
- Description serine-type peptidase activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Anthoceros agrestis | Sc2ySwM_368 | 3 | CH_aag_82 | 7 | 46 | 0.0000127775 |
| Aethionema arabicum | sc-23 | 3 | CH_aar_78 | 7 | 15 | 0.000000191162 |
| Acer truncatum | chr11 | 3 | CH_acertr_400 | 4 | 5 | 0.000216288 |
| Actinidia chinensis | Lachesis_group24 | 3 | CH_ach_243 | 4 | 6 | 0.000573744 |
| Arabidopsis lyrata | scaffold_6 | 3 | CH_aly_298 | 7 | 43 | 0.000513264 |
| Avicennia marina | ScioBoG_19834_HRSCAF_19925 | 3 | CH_ama_100 | 4 | 5 | 0.000264395 |
| Camellia sinensis var. sinensis | Chr4 | 3 | CH_camsi_765 | 4 | 6 | 0.000497336 |
| Cannabis sativa | NC_044379.1 | 3 | CH_cansat_249 | 5 | 15 | 0.00014538 |
| Coffea canephora | chr10 | 3 | CH_ccan_297 | 5 | 76 | 0.00022202 |
| Citrus clementina | scaffold_8 | 3 | CH_ccl_65 | 10 | 16 | 0.000000000000115498 |
| Carpinus fangiana | Cfa04 | 3 | CH_cfa_150 | 6 | 12 | 0.00000196429 |
| Cardamine hirsuta | Chr6 | 3 | CH_chi_266 | 7 | 39 | 0.000195415 |
| Carya illinoinensis | Chr13 | 3 | CH_cil_172 | 6 | 8 | 0.0000000274236 |
| Citrullus lanatus | CG_Chr07 | 3 | CH_cla_66 | 5 | 7 | 0.00000322618 |
| Cucumis melo | chr10 | 3 | CH_cme_216 | 5 | 14 | 0.000220279 |
| Cucumis sativus L. | chr5 | 3 | CH_csa_155 | 5 | 9 | 0.0000187775 |
| Cucumis sativus L. | chr6 | 3 | CH_csa_199 | 4 | 5 | 0.000133158 |
| Eucalyptus grandis | Chr10 | 3 | CH_egr_145 | 14 | 35 | 1.37859e-16 |
| Eucalyptus grandis | Chr06 | 3 | CH_egr_617 | 5 | 7 | 0.0000191342 |
| Fragaria x ananassa | Fvb3-2 | 3 | CH_fan_307 | 6 | 16 | 0.0000230944 |
| Fragaria vesca | Fvb2 | 3 | CH_fve_117 | 6 | 8 | 0.0000000258823 |
| Fragaria vesca | Fvb3 | 3 | CH_fve_315 | 5 | 13 | 0.000213607 |
| Gossypium hirsutum | D09 | 3 | CH_ghi_611 | 4 | 5 | 0.000523279 |
| Hydrangea macrophylla | Hma1.2p1_0051F.1 | 3 | CH_hma_111 | 4 | 4 | 0.0000189129 |
| Lupinus albus | Lalb_Chr01 | 3 | CH_lal_21 | 11 | 13 | 6.21576e-17 |
| Magnolia biondii | Chr17 | 3 | CH_mbi_118 | 8 | 18 | 0.000000000773213 |
| Manihot esculenta | Chromosome11 | 3 | CH_mes_173 | 6 | 9 | 0.000000251808 |
| Manihot esculenta | Chromosome14 | 3 | CH_mes_187 | 5 | 5 | 0.000000458134 |
| Marchantia polymorpha | scaffold_135 | 3 | CH_mpo_116 | 4 | 9 | 0.000609208 |
| Nelumbo nucifera | chr2 | 3 | CH_nnu_201 | 5 | 11 | 0.0000712248 |
| Prunus persica | Pp01 | 3 | CH_ppe_263 | 5 | 7 | 0.00000802559 |
| Pisum sativum | chr5LG3 | 3 | CH_psa_257 | 7 | 42 | 0.000117469 |
| Papaver somniferum | NC_039358.1 | 3 | CH_pso_345 | 6 | 18 | 0.00000345242 |
| Populus trichocarpa | Chr01 | 3 | CH_ptr_164 | 6 | 7 | 0.0000000170312 |
| Phaseolus vulgaris | Chr05 | 3 | CH_pvu_263 | 5 | 10 | 0.0000916205 |
| Quercus lobata | 1 | 3 | CH_qlo_204 | 14 | 63 | 0.0000000000028011 |
| Quercus lobata | 4 | 3 | CH_qlo_501 | 6 | 9 | 0.000000737743 |
| Rosa chinensis | RcHm_v2.0_Chr5 | 3 | CH_rch_470 | 6 | 20 | 0.000027729 |
| Rhododendron simsii | chr13 | 3 | CH_rsi_275 | 5 | 7 | 0.00000380771 |
| Salvia bowleyana | GWHASIU00000001 | 3 | CH_sbo_464 | 4 | 7 | 0.000571627 |
| Sechium edule | LG06 | 3 | CH_sed_83 | 6 | 9 | 0.00000012584 |
| Sequoiadendron giganteum | chr3 | 3 | CH_sgi_630 | 6 | 8 | 0.000000164416 |
| Sequoiadendron giganteum | chr2 | 3 | CH_sgi_709 | 5 | 5 | 0.000000827287 |
| Solanum lycopersicum | SL4.0ch01 | 3 | CH_sly_12 | 16 | 23 | 1.76474e-25 |
| Solanum pennellii | Spenn-ch01 | 3 | CH_spe_19 | 11 | 19 | 6.82078e-17 |
| Solanum tuberosum | ST4.03ch01 | 3 | CH_stu_22 | 14 | 22 | 9.99283e-23 |
| Theobroma cacao | Chromosome_9 | 3 | CH_tca_214 | 5 | 7 | 0.00000745859 |
| Trifolium pratense | Tp57577_TGAC_v2_scaf_267 | 3 | CH_tpr_352 | 4 | 5 | 0.000696269 |
| Vaccinium macrocarpon | chr9_Vaccinium_macrocarpon_Stevens_v1 | 3 | CH_vma_316 | 6 | 24 | 0.00029273 |
| Vitis vinifera | chr6 | 3 | CH_vvi_110 | 7 | 9 | 0.0000000025949 |
| Anthoceros agrestis | Sc2ySwM_368 | 4 | CH_aag_82 | 7 | 46 | 0.0000127775 |
| Aethionema arabicum | sc-23 | 4 | CH_aar_78 | 7 | 15 | 0.000000191162 |
| Acer truncatum | chr11 | 4 | CH_acertr_400 | 4 | 5 | 0.000216288 |
| Actinidia chinensis | Lachesis_group24 | 4 | CH_ach_243 | 4 | 6 | 0.000573744 |
| Arabidopsis lyrata | scaffold_6 | 4 | CH_aly_298 | 7 | 43 | 0.000513264 |
| Avicennia marina | ScioBoG_19834_HRSCAF_19925 | 4 | CH_ama_100 | 4 | 5 | 0.000264395 |
| Camellia sinensis var. sinensis | Chr4 | 4 | CH_camsi_765 | 4 | 6 | 0.000497336 |
| Cannabis sativa | NC_044379.1 | 4 | CH_cansat_249 | 5 | 15 | 0.00014538 |
| Coffea canephora | chr10 | 4 | CH_ccan_297 | 5 | 76 | 0.00022202 |
| Citrus clementina | scaffold_8 | 4 | CH_ccl_65 | 10 | 16 | 0.000000000000115498 |
| Carpinus fangiana | Cfa04 | 4 | CH_cfa_150 | 6 | 12 | 0.00000196429 |
| Cardamine hirsuta | Chr6 | 4 | CH_chi_266 | 7 | 39 | 0.000195415 |
| Carya illinoinensis | Chr13 | 4 | CH_cil_172 | 6 | 8 | 0.0000000274236 |
| Citrullus lanatus | CG_Chr07 | 4 | CH_cla_66 | 5 | 7 | 0.00000322618 |
| Cucumis melo | chr10 | 4 | CH_cme_216 | 5 | 14 | 0.000220279 |
| Cucumis sativus L. | chr5 | 4 | CH_csa_155 | 5 | 9 | 0.0000187775 |
| Cucumis sativus L. | chr6 | 4 | CH_csa_199 | 4 | 5 | 0.000133158 |
| Eucalyptus grandis | Chr10 | 4 | CH_egr_145 | 14 | 35 | 1.37859e-16 |
| Eucalyptus grandis | Chr06 | 4 | CH_egr_617 | 5 | 7 | 0.0000191342 |
| Fragaria x ananassa | Fvb3-2 | 4 | CH_fan_307 | 6 | 16 | 0.0000230944 |
| Fragaria vesca | Fvb2 | 4 | CH_fve_117 | 6 | 8 | 0.0000000258823 |
| Fragaria vesca | Fvb3 | 4 | CH_fve_315 | 5 | 13 | 0.000213607 |
| Gossypium hirsutum | D09 | 4 | CH_ghi_611 | 4 | 5 | 0.000523279 |
| Hydrangea macrophylla | Hma1.2p1_0051F.1 | 4 | CH_hma_111 | 4 | 4 | 0.0000189129 |
| Lupinus albus | Lalb_Chr01 | 4 | CH_lal_21 | 11 | 13 | 6.21576e-17 |
| Magnolia biondii | Chr17 | 4 | CH_mbi_118 | 8 | 18 | 0.000000000773213 |
| Manihot esculenta | Chromosome11 | 4 | CH_mes_173 | 6 | 9 | 0.000000251808 |
| Manihot esculenta | Chromosome14 | 4 | CH_mes_187 | 5 | 5 | 0.000000458134 |
| Marchantia polymorpha | scaffold_135 | 4 | CH_mpo_116 | 4 | 9 | 0.000609208 |
| Nelumbo nucifera | chr2 | 4 | CH_nnu_201 | 5 | 11 | 0.0000712248 |
| Prunus persica | Pp01 | 4 | CH_ppe_263 | 5 | 7 | 0.00000802559 |
| Pisum sativum | chr5LG3 | 4 | CH_psa_257 | 7 | 42 | 0.000117469 |
| Papaver somniferum | NC_039358.1 | 4 | CH_pso_345 | 6 | 18 | 0.00000345242 |
| Populus trichocarpa | Chr01 | 4 | CH_ptr_164 | 6 | 7 | 0.0000000170312 |
| Phaseolus vulgaris | Chr05 | 4 | CH_pvu_263 | 5 | 10 | 0.0000916205 |
| Quercus lobata | 1 | 4 | CH_qlo_204 | 14 | 63 | 0.0000000000028011 |
| Quercus lobata | 4 | 4 | CH_qlo_501 | 6 | 9 | 0.000000737743 |
| Rosa chinensis | RcHm_v2.0_Chr5 | 4 | CH_rch_470 | 6 | 20 | 0.000027729 |
| Rhododendron simsii | chr13 | 4 | CH_rsi_275 | 5 | 7 | 0.00000380771 |
| Salvia bowleyana | GWHASIU00000001 | 4 | CH_sbo_464 | 4 | 7 | 0.000571627 |
| Sechium edule | LG06 | 4 | CH_sed_83 | 6 | 9 | 0.00000012584 |
| Sequoiadendron giganteum | chr3 | 4 | CH_sgi_630 | 6 | 8 | 0.000000164416 |
| Sequoiadendron giganteum | chr2 | 4 | CH_sgi_709 | 5 | 5 | 0.000000827287 |
| Solanum lycopersicum | SL4.0ch01 | 4 | CH_sly_12 | 16 | 23 | 1.76474e-25 |
| Solanum pennellii | Spenn-ch01 | 4 | CH_spe_19 | 11 | 19 | 6.82078e-17 |
| Solanum tuberosum | ST4.03ch01 | 4 | CH_stu_22 | 14 | 22 | 9.99283e-23 |
| Theobroma cacao | Chromosome_9 | 4 | CH_tca_214 | 5 | 7 | 0.00000745859 |
| Trifolium pratense | Tp57577_TGAC_v2_scaf_267 | 4 | CH_tpr_352 | 4 | 5 | 0.000696269 |
| Vaccinium macrocarpon | chr9_Vaccinium_macrocarpon_Stevens_v1 | 4 | CH_vma_316 | 6 | 24 | 0.00029273 |
| Vitis vinifera | chr6 | 4 | CH_vvi_110 | 7 | 9 | 0.0000000025949 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:0004185 | serine-type carboxypeptidase activity | 474 |
| GO:0004252 | serine-type endopeptidase activity | 472 |
| GO:0008240 | tripeptidyl-peptidase activity | 6 |
| GO:0070008 | serine-type exopeptidase activity | 2 |
| GO:0070009 | serine-type aminopeptidase activity | 34 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |