Functional clusters
Information
- Type Gene Ontology
- Description metalloendopeptidase activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr3 | 3 | CH_acertr_246 | 5 | 17 | 0.0000125923 |
| Actinidia chinensis | Lachesis_group25 | 3 | CH_ach_277 | 3 | 4 | 0.000967838 |
| Beta vulgaris | Chr3_EL10_PGA_scaffold7 | 3 | CH_bvu_91 | 4 | 4 | 0.00000033131 |
| Capsicum annuum | PGAv.1.6.scaffold1061 | 3 | CH_can_64 | 6 | 6 | 0.000000000000332419 |
| Corchorus olitorius | AWUE01016436.1 | 3 | CH_col_23 | 5 | 6 | 0.0000000028044 |
| Eucalyptus grandis | Chr11 | 3 | CH_egr_343 | 5 | 6 | 0.00000000137093 |
| Fragaria x ananassa | Fvb7-2 | 3 | CH_fan_515 | 3 | 3 | 0.000605828 |
| Fragaria vesca | Fvb7 | 3 | CH_fve_305 | 3 | 3 | 0.000187355 |
| Nicotiana tabacum | Nitab4.5_0000139 | 3 | CH_nta_98 | 3 | 3 | 0.000128956 |
| Punica granatum | NC_045131.1 | 3 | CH_pgr_162 | 4 | 4 | 0.000000661489 |
| Rosa chinensis | RcHm_v2.0_Chr7 | 3 | CH_rch_713 | 3 | 4 | 0.000521447 |
| Sequoiadendron giganteum | chr10 | 3 | CH_sgi_1071 | 3 | 3 | 0.000128118 |
| Sequoiadendron giganteum | chr10 | 3 | CH_sgi_1303 | 3 | 4 | 0.000511918 |
| Sequoiadendron giganteum | chr8 | 3 | CH_sgi_1358 | 4 | 20 | 0.000861187 |
| Sequoiadendron giganteum | chr6 | 3 | CH_sgi_439 | 5 | 6 | 0.0000000015062 |
| Tarenaya hassleriana | NW_010966986.1 | 3 | CH_tha_30 | 5 | 6 | 0.00000000306978 |
| Vigna mungo | CM024079.1 | 3 | CH_vmu_249 | 3 | 3 | 0.000214309 |
| Acer truncatum | chr3 | 4 | CH_acertr_246 | 5 | 17 | 0.0000125923 |
| Actinidia chinensis | Lachesis_group25 | 4 | CH_ach_277 | 3 | 4 | 0.000967838 |
| Beta vulgaris | Chr3_EL10_PGA_scaffold7 | 4 | CH_bvu_91 | 4 | 4 | 0.00000033131 |
| Capsicum annuum | PGAv.1.6.scaffold1061 | 4 | CH_can_64 | 6 | 6 | 0.000000000000332419 |
| Corchorus olitorius | AWUE01016436.1 | 4 | CH_col_23 | 5 | 6 | 0.0000000028044 |
| Eucalyptus grandis | Chr11 | 4 | CH_egr_343 | 5 | 6 | 0.00000000137093 |
| Fragaria x ananassa | Fvb7-2 | 4 | CH_fan_515 | 3 | 3 | 0.000605828 |
| Fragaria vesca | Fvb7 | 4 | CH_fve_305 | 3 | 3 | 0.000187355 |
| Nicotiana tabacum | Nitab4.5_0000139 | 4 | CH_nta_98 | 3 | 3 | 0.000128956 |
| Punica granatum | NC_045131.1 | 4 | CH_pgr_162 | 4 | 4 | 0.000000661489 |
| Rosa chinensis | RcHm_v2.0_Chr7 | 4 | CH_rch_713 | 3 | 4 | 0.000521447 |
| Sequoiadendron giganteum | chr10 | 4 | CH_sgi_1071 | 3 | 3 | 0.000128118 |
| Sequoiadendron giganteum | chr10 | 4 | CH_sgi_1303 | 3 | 4 | 0.000511918 |
| Sequoiadendron giganteum | chr8 | 4 | CH_sgi_1358 | 4 | 20 | 0.000861187 |
| Sequoiadendron giganteum | chr6 | 4 | CH_sgi_439 | 5 | 6 | 0.0000000015062 |
| Tarenaya hassleriana | NW_010966986.1 | 4 | CH_tha_30 | 5 | 6 | 0.00000000306978 |
| Vigna mungo | CM024079.1 | 4 | CH_vmu_249 | 3 | 3 | 0.000214309 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |