Functional clusters

Information

  • Type Gene Ontology
  • Description NEDD8-specific protease activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amaranthus hybridus AmaHy_arrow1_Scaffold_2 3 CH_amhyb_181 2 2 0.000505051
Camellia sinensis var. sinensis Chr11 3 CH_camsi_156 5 11 0.00000000181425
Fragaria x ananassa Fvb4-2 3 CH_fan_547 2 2 0.000832663
Lonicera japonica GWHAAZE00000001 3 CH_lonja_206 3 3 0.0000000215197
Oryza sativa ssp. japonica chr12 3 CH_osa_258 3 14 0.0000304294
Trochodendron aralioides group13 3 CH_tar_444 2 2 0.000600366
Amaranthus hybridus AmaHy_arrow1_Scaffold_2 4 CH_amhyb_181 2 2 0.000505051
Camellia sinensis var. sinensis Chr11 4 CH_camsi_156 5 11 0.00000000181425
Fragaria x ananassa Fvb4-2 4 CH_fan_547 2 2 0.000832663
Lonicera japonica GWHAAZE00000001 4 CH_lonja_206 3 3 0.0000000215197
Oryza sativa ssp. japonica chr12 4 CH_osa_258 3 14 0.0000304294
Trochodendron aralioides group13 4 CH_tar_444 2 2 0.000600366

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001