Functional clusters

Information

  • Type Gene Ontology
  • Description regulation of response to biotic stimulus

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Hydrangea macrophylla Hma1.2p1_0661F.1 3 CH_hma_275 7 39 0.00038444
Hydrangea macrophylla Hma1.2p1_0661F.1 4 CH_hma_275 7 39 0.00038444

Available child term results

Ontology identifier Description Number of clusters
GO:0002220 innate immune response activating cell surface receptor signaling pathway 16
GO:0002230 positive regulation of defense response to virus by host 40
GO:0002752 cell surface pattern recognition receptor signaling pathway 4
GO:0002758 innate immune response-activating signal transduction 30
GO:0009864 induced systemic resistance, jasmonic acid mediated signaling pathway 8
GO:0009866 induced systemic resistance, ethylene mediated signaling pathway 8
GO:0010112 regulation of systemic acquired resistance 38
GO:0010363 regulation of plant-type hypersensitive response 2
GO:0034051 negative regulation of plant-type hypersensitive response 2
GO:0034052 positive regulation of plant-type hypersensitive response 2
GO:0045088 regulation of innate immune response 4
GO:0050691 regulation of defense response to virus by host 2
GO:0051841 positive regulation by host of cytolysis of symbiont cells 32
GO:0140426 PAMP-triggered immunity signalling pathway 2
GO:1900150 regulation of defense response to fungus 12
GO:1900366 negative regulation of defense response to insect 2
GO:1900367 positive regulation of defense response to insect 6
GO:1900424 regulation of defense response to bacterium 12
GO:1900425 negative regulation of defense response to bacterium 36
GO:1900426 positive regulation of defense response to bacterium 8
GO:1901672 positive regulation of systemic acquired resistance 8
GO:1902288 regulation of defense response to oomycetes 40
GO:1902289 negative regulation of defense response to oomycetes 4
GO:1902290 positive regulation of defense response to oomycetes 22
GO:1905034 regulation of antifungal innate immune response 8

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001