Functional clusters

Information

  • Type Gene Ontology
  • Description regulation of innate immune response

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Erythranthe guttata scaffold_13 3 CH_egut_259 3 4 0.000056308
Manihot esculenta Chromosome03 3 CH_mes_208 4 10 0.00000213736
Erythranthe guttata scaffold_13 4 CH_egut_259 3 4 0.000056308
Manihot esculenta Chromosome03 4 CH_mes_208 4 10 0.00000213736

Available child term results

Ontology identifier Description Number of clusters
GO:0002220 innate immune response activating cell surface receptor signaling pathway 16
GO:0002752 cell surface pattern recognition receptor signaling pathway 4
GO:0002758 innate immune response-activating signal transduction 30
GO:0009864 induced systemic resistance, jasmonic acid mediated signaling pathway 8
GO:0009866 induced systemic resistance, ethylene mediated signaling pathway 8
GO:0010363 regulation of plant-type hypersensitive response 2
GO:0034051 negative regulation of plant-type hypersensitive response 2
GO:0034052 positive regulation of plant-type hypersensitive response 2
GO:0140426 PAMP-triggered immunity signalling pathway 2
GO:1905034 regulation of antifungal innate immune response 8

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001