Functional clusters
Information
- Type Gene Ontology
- Description regulation of innate immune response
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Erythranthe guttata | scaffold_13 | 3 | CH_egut_259 | 3 | 4 | 0.000056308 |
Manihot esculenta | Chromosome03 | 3 | CH_mes_208 | 4 | 10 | 0.00000213736 |
Erythranthe guttata | scaffold_13 | 4 | CH_egut_259 | 3 | 4 | 0.000056308 |
Manihot esculenta | Chromosome03 | 4 | CH_mes_208 | 4 | 10 | 0.00000213736 |
Available child term results
Ontology identifier | Description | Number of clusters |
---|---|---|
GO:0002220 | innate immune response activating cell surface receptor signaling pathway | 16 |
GO:0002752 | cell surface pattern recognition receptor signaling pathway | 4 |
GO:0002758 | innate immune response-activating signal transduction | 30 |
GO:0009864 | induced systemic resistance, jasmonic acid mediated signaling pathway | 8 |
GO:0009866 | induced systemic resistance, ethylene mediated signaling pathway | 8 |
GO:0010363 | regulation of plant-type hypersensitive response | 2 |
GO:0034051 | negative regulation of plant-type hypersensitive response | 2 |
GO:0034052 | positive regulation of plant-type hypersensitive response | 2 |
GO:0140426 | PAMP-triggered immunity signalling pathway | 2 |
GO:1905034 | regulation of antifungal innate immune response | 8 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |