Functional clusters
Information
- Type Gene Ontology
- Description positive regulation of defense response to oomycetes
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aquilegia oxysepala | CHR04 | 3 | CH_aox_123 | 3 | 3 | 0.00000540298 |
| Aquilegia oxysepala | CHR04 | 3 | CH_aox_164 | 3 | 5 | 0.0000539832 |
| Camellia sinensis var. sinensis | Chr5 | 3 | CH_camsi_640 | 3 | 13 | 0.000198101 |
| Cannabis sativa | NC_044370.1 | 3 | CH_cansat_158 | 3 | 4 | 0.0000073972 |
| Citrus clementina | scaffold_9 | 3 | CH_ccl_367 | 3 | 8 | 0.00025667 |
| Citrus clementina | scaffold_9 | 3 | CH_ccl_87 | 5 | 8 | 0.0000000000570593 |
| Carya illinoinensis | Chr01 | 3 | CH_cil_91 | 7 | 33 | 0.000000000000962852 |
| Manihot esculenta | Chromosome14 | 3 | CH_mes_126 | 4 | 4 | 0.00000000124328 |
| Populus trichocarpa | Chr18 | 3 | CH_ptr_108 | 5 | 7 | 0.0000000000204295 |
| Rhododendron simsii | chr06 | 3 | CH_rsi_82 | 6 | 14 | 0.000000000000226665 |
| Vitis vinifera | chr14 | 3 | CH_vvi_74 | 5 | 6 | 0.00000000000452279 |
| Aquilegia oxysepala | CHR04 | 4 | CH_aox_123 | 3 | 3 | 0.00000540298 |
| Aquilegia oxysepala | CHR04 | 4 | CH_aox_164 | 3 | 5 | 0.0000539832 |
| Camellia sinensis var. sinensis | Chr5 | 4 | CH_camsi_640 | 3 | 13 | 0.000198101 |
| Cannabis sativa | NC_044370.1 | 4 | CH_cansat_158 | 3 | 4 | 0.0000073972 |
| Citrus clementina | scaffold_9 | 4 | CH_ccl_367 | 3 | 8 | 0.00025667 |
| Citrus clementina | scaffold_9 | 4 | CH_ccl_87 | 5 | 8 | 0.0000000000570593 |
| Carya illinoinensis | Chr01 | 4 | CH_cil_91 | 7 | 33 | 0.000000000000962852 |
| Manihot esculenta | Chromosome14 | 4 | CH_mes_126 | 4 | 4 | 0.00000000124328 |
| Populus trichocarpa | Chr18 | 4 | CH_ptr_108 | 5 | 7 | 0.0000000000204295 |
| Rhododendron simsii | chr06 | 4 | CH_rsi_82 | 6 | 14 | 0.000000000000226665 |
| Vitis vinifera | chr14 | 4 | CH_vvi_74 | 5 | 6 | 0.00000000000452279 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |