Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p18970 Brassica napus
Aa31LG10G2500 Aethionema arabicum
Actinidia08791 Actinidia chinensis
Actinidia08958 Actinidia chinensis
Ah.01g020480 Amaranthus hybridus
AL1G60740 Arabidopsis lyrata
AL1G60750 Arabidopsis lyrata
AL7G45760 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.5T1ZSX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RDN84X Arachis hypogaea
AT1G52500 Arabidopsis thaliana
ATR0800G026 Amborella trichopoda
Atru.chr1.2881 Acer truncatum
AUR62011503 Chenopodium quinoa
AUR62016319 Chenopodium quinoa
BcaB02g10988 Brassica carinata
BcaC08g43998 Brassica carinata
BolC4t26141H Brassica oleracea
BolC6t36581H Brassica oleracea
BraA05t20794Z Brassica rapa
CAN.G407.11 Capsicum annuum
CANSAT56G0666 Cannabis sativa
CARHR042600 Cardamine hirsuta
CARHR042620 Cardamine hirsuta
Carub.0001s4146 Capsella rubella
Ca_01048_v3 Cicer arietinum L.
CBR_g884 Chara braunii
Cc04_g04560 Coffea canephora
CDE05G1298 Ceratophyllum demersum
Cfa001944 Carpinus fangiana
Cfa001945 Carpinus fangiana
Cfa026683 Carpinus fangiana
Ciclev10025737m.g Citrus clementina
CiPaw.01G249800 Carya illinoinensis
ClCG07G012240 Citrullus lanatus
COL.COLO4_11898 Corchorus olitorius
Cpa.g.sc167.9 Carica papaya
Cre10.g428433 Chlamydomonas reinhardtii
CsaV3_4G001910 Cucumis sativus L.
CSS0022367 Camellia sinensis var. sinensis
DCAR_025523 Daucus carota
Dinv01702 Davidia involucrata
Dinv21460 Davidia involucrata
Dinv30625 Davidia involucrata
Duzib235G0399 Durio zibethinus
ECA247G0880 Erigeron canadensis
EL10Ac9g21886 Beta vulgaris
Eucgr.F03905 Eucalyptus grandis
Eucgr.L03570 Eucalyptus grandis
FAN05G1370 Fragaria x ananassa
FAN09G4542 Fragaria x ananassa
FAN14G2225 Fragaria x ananassa
FvH4_6g29401 Fragaria vesca
Glyma.13G366800 Glycine max
Gohir.A10G068900 Gossypium hirsutum
Gohir.D10G074901 Gossypium hirsutum
Gohir.D10G082500 Gossypium hirsutum
Gorai.011G089400 Gossypium raimondii
GSVIVG01017379001 Vitis vinifera
GSVIVG01026354001 Vitis vinifera
HanXRQChr02g0033451 Helianthus annuus
HanXRQChr02g0033461 Helianthus annuus
HanXRQChr02g0033471 Helianthus annuus
Haze_16582 Corylus avellana
Hma1.2p1_0017F.1_g011320 Hydrangea macrophylla
HPP92_003851 Vanilla planifolia
Hund00502 Selenicereus undatus
Lalb_Chr24g0395421 Lupinus albus
Lj3g0003829 Lotus japonicus
Lj5A75T43 Lonicera japonica
Lsat_1_v5_gn_1_34180 Lactuca sativa
Manes.04G110800 Manihot esculenta
Manes.11G058700 Manihot esculenta
Mapoly0015s0062 Marchantia polymorpha
MBI15_g24195_MAGBIO Magnolia biondii
MCO15G481 Micromonas commoda
MD17G1215000 Malus domestica
Medtr2g104100 Medicago truncatula
Medtr3g118550 Medicago truncatula
MELO3C017842.2 Cucumis melo
Migut.I00747 Erythranthe guttata
MSTRG.11153 Avicennia marina
Nitab4.5_0003072g0060 Nicotiana tabacum
Nitab4.5_0010806g0010 Nicotiana tabacum
Nn8g39568 Nelumbo nucifera
Os06g0643600 Oryza sativa ssp. japonica
Os08g0304900 Oryza sativa ssp. japonica
Peaxi162Scf00553g00627 Petunia axillaris
PGR102G2220 Punica granatum
PGSC0003DMG400014146 Solanum tuberosum
Phvul.005G179300 Phaseolus vulgaris
Potri.003G031100 Populus trichocarpa
Pp3c23_21520 Physcomitrium patens
Pp3c24_20180 Physcomitrium patens
Pp3c8_24280 Physcomitrium patens
Prupe.3G090700 Prunus persica
Psat5g303120 Pisum sativum
Psat6g066000 Pisum sativum
PSO017G4202 Papaver somniferum
PSO170G6797 Papaver somniferum
QL05p032033 Quercus lobata
RcHm_v2.0_Chr2g0134861 Rosa chinensis
Rhsim12G0190000 Rhododendron simsii
Sabra03G0017500 Salix brachista
Sabra14G0094900 Salix brachista
SalBow2G3638 Salvia bowleyana
Sc10g0008130 Simmondsia chinensis
Sed0013008 Sechium edule
SEGI_24777 Sequoiadendron giganteum
SEGI_39009 Sequoiadendron giganteum
SGA_v2.0_scaffold5G02719 Striga asiatica
SGA_v2.0_scaffold72G24067 Striga asiatica
SHI11225 Sapria himalayana
SMO367G0330 Selaginella moellendorffii
Solyc03g117510.4 Solanum lycopersicum
Sopen03g036410 Solanum pennellii
Sp1g39050 Schrenkiella parvula
TAR626G1009 Trochodendron aralioides
THA.LOC104818014 Tarenaya hassleriana
Thecc.06G031100 Theobroma cacao
Thecc.09G173900 Theobroma cacao
Thhalv10011553m.g Eutrema salsugineum
TPR.G37262 Trifolium pratense
TWI12G0620 Tripterygium wilfordii
unitig_62.g23594 Utricularia gibba
vmacro16879 Vaccinium macrocarpon
VMungo1080G1109 Vigna mungo
Zm00001eb275260 Zea mays

User provided reference genes

Program Settings