Gene: PSO017G4202
General Information
Structural Information
- Species Papaver somniferum
- Gene Identifier PSO017G4202
- Transcript Identifier PSO017G4202.01
- Gene Type Coding gene
- Location NC_039362.1 : 132670921-132673500 : positive
Gene Family Information
- ID HOM05D006093
- #Genes/#Species 130/97
- Phylogenetic origin
- ID ORTHO05D007652
- #Genes/#Species 128/96
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid rna-XM_026531828.1
- pid XP_026387613.1
- id gene-LOC113282760
Descriptions
- product formamidopyrimidine-DNA glycosylase-like, transcript variant X1
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006284 | IEA | InterPro | base-excision repair | |
| GO:0006281 | ISO | PLAZA Integrative Orthology | DNA repair | AT1G52500 |
| GO:0006979 | ISO | PLAZA Integrative Orthology | response to oxidative stress | AT1G52500 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003684 | IEA | InterPro | damaged DNA binding | |
| GO:0003906 | IEA | InterPro | DNA-(apurinic or apyrimidinic site) endonuclease activity | |
| GO:0008270 | IEA | InterPro | zinc ion binding | |
| GO:0016799 | IEA | InterPro | hydrolase activity, hydrolyzing N-glycosyl compounds | |
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0019104 | ISO | PLAZA Integrative Orthology | DNA N-glycosylase activity | AT1G52500 |
| GO:0008534 | ISO | PLAZA Homology (enrichment) | oxidized purine nucleobase lesion DNA N-glycosylase activity | HOM05D006093 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 14.5.1 | DNA damage response.base excision repair (BER).formamidopyrimidine-DNA glycosylase (FPG1) |